Gene Sden_2195 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2195 
Symbol 
ID4018687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2606432 
End bp2607301 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID637956218 
Productbeta-lactamase-like protein 
Protein accessionYP_563199 
Protein GI91793548 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCTTAG CTCGTTACAC TCTTTTAGGC CTTAGCCTTT GTAGCCTACT TGTGCCTCAG 
TTTGCCCATG CTCAAGCAGA CAGATTTGCA GAAGTACAGA TAACTCAGAC CCAGTTAGCC
GAAAATGTGT ATGTGTTTAT GGGGGCTGGC GGCAACATTG GCGTCTCTTC TGGCATAGAT
GGCTTGCTCA TCATAGACGA TCAGTTCGCC CCTTTGGCCG AGAAAATTAC CGCAGCCCTC
AATACTCTGC AGGTCGGCAT GCCAAAGTAT GTGATTAATA CCCATTTCCA TGGGGATCAC
ACAGGTGCCA ATGAGCACTT CGGTCAGCAA GGCACTATTT TGGCTCACCA TAATGTATTG
AGTCGCCTGA GCGAAAATAA AAGCCTCAAT AAAGTCGCGC TGCCAGTAAT CACCTTCGAT
AAAGGCCTGT CGGTGCATTT CAATAATGAC ACCTTAGCGG TTAAGCACTT AGGTCCTGGC
CACACGGATG GCGACAGCAT AGTCATTTGG GAAAAAGCCA ATATCATCCA TATGGGCGAC
TTGTTTTTTA AAGACAAATT TCCTTTTATC GACTTAGATC ATGGCGGCTC TATTTTGGGT
TATCGCAACA ATGTGTCAGC GGCCCTTAGT TTGATCAATG ATAAGACCCA AGTGATCCCA
GGTCATGGCG AAATGGCCAC CAAAAACGAT CTCTTAAAGT TTAAGCACAT GCTCGATGAC
AGCATCAACT GGATGCGAAA GGAAATCAGT CTAGGCAAGA ACCTGAAGCA AATCAAAAAA
CAAGGGGTAC CGAAAAAGTG GAAAAACTGG GGTTGGAACT TTATCTCCGA AGATAAATGG
ATCAATACCT TGTACCAAGG TTTGATGTAG
 
Protein sequence
MFLARYTLLG LSLCSLLVPQ FAHAQADRFA EVQITQTQLA ENVYVFMGAG GNIGVSSGID 
GLLIIDDQFA PLAEKITAAL NTLQVGMPKY VINTHFHGDH TGANEHFGQQ GTILAHHNVL
SRLSENKSLN KVALPVITFD KGLSVHFNND TLAVKHLGPG HTDGDSIVIW EKANIIHMGD
LFFKDKFPFI DLDHGGSILG YRNNVSAALS LINDKTQVIP GHGEMATKND LLKFKHMLDD
SINWMRKEIS LGKNLKQIKK QGVPKKWKNW GWNFISEDKW INTLYQGLM