| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2184 |
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| Symbol | sdhB |
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| ID | 4018676 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2591205 |
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| End bp | 2591912 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637956208 |
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| Product | succinate dehydrogenase iron-sulfur subunit |
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| Protein accession | YP_563189 |
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| Protein GI | 91793538 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
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| TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.215691 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAATTAA CATTTGCAGT GTATCGTTAT AACCCTGATG TAGATACCAA GCCTTACATG
AAGGATTACA TCTTAGAAGT GCCAGACGGC TCCGATATGA TGGTGTTAGA TGCACTTATA
AAGCTTAAAG AACAAGACTC AACCTTAGCG TTCCGTCGCT CATGCCGTGA AGGTGTGTGT
GGATCAGACG GCGTTAACAT GAACGGTAAA AATGGCTTGG CGTGTATCAC GCCACTTTCA
ACCTTAAAGG GTAAGAAGAT TGAAATACGC CCATTACCAG GCATGCCGGT TGTTCGTGAC
TTAGTGGTTG ATTTAACTCA ATTCTATAAG CAATACGAAA AAATTAAGCC TTTCCTTATC
AATGATGAGA AGGCGCCAGC ACGTGAGCAT TTACAATCAC CTGAAGAGCG CGAGCACTTA
GATGGTTTGT ATGAATGTAT TATGTGCGCT TGTTGTTCAA CTGCTTGCCC ATCTTTCTGG
TGGAATCCGG ATAAGTTTAT CGGTCCAAGT GGTTTGTTAC ATGCTTACCG TTTCTTGATT
GATAGCCGTG ATACGGCCAC TGAAGAGCGT TTATCAGAAC TTGATGATGC TTACAGTGTG
TTTCGTTGCC ATGGCATCAT GAACTGTGTT GATGTGTGTC CAAAAGGCTT AAACCCTACT
AAAGCCATTG GTCATATTAA GTCAATGCTA CTCAAGCGAG CGGTATAA
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| Protein sequence | MKLTFAVYRY NPDVDTKPYM KDYILEVPDG SDMMVLDALI KLKEQDSTLA FRRSCREGVC
GSDGVNMNGK NGLACITPLS TLKGKKIEIR PLPGMPVVRD LVVDLTQFYK QYEKIKPFLI
NDEKAPAREH LQSPEEREHL DGLYECIMCA CCSTACPSFW WNPDKFIGPS GLLHAYRFLI
DSRDTATEER LSELDDAYSV FRCHGIMNCV DVCPKGLNPT KAIGHIKSML LKRAV
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