| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2183 |
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| Symbol | sucA |
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| ID | 4018675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2588172 |
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| End bp | 2590994 |
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| Gene Length | 2823 bp |
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| Protein Length | 940 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956207 |
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| Product | 2-oxoglutarate dehydrogenase E1 component |
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| Protein accession | YP_563188 |
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| Protein GI | 91793537 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
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| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCAAG GCATCATGAA AGCCTGGCTC GAATCATCAC ATCTAAGTGG TGCTAACTCG
ACCTACGTAG AAGAGATGTA CGAAGCCTAT CAAGTAGACC CTGATTCAGT TGCTGCTGAT
TGGCGCGTCG TTTTTGATAA TCTCCCTCCG GTAAATGGTG CCTCTGCAGA AGTGCCAGAA
GCTGCCCATT CAAAAGTACG TGACTATTTT CGAAGTGTCG CTTTAGCGGG TCGATTAAAA
GGCGCGGGAA GCGTCAGCGA TCCAGAATTA GATTCGAAGC AAGTTAAAGT ACTGCAATTG
ATCAATGCCC ACCGTTTCCG TGGTCATCAA AACGCTAACT TAGACCCATT GGGTTTGTGG
AAGCGTGAAG CCGTGTCTGA ATTAGATCCT AAGTTCCATG ATTTTAATGA TGAAGACATG
CAAAGAGAAT TCAATACAGG TTCGTTCGCC TTAGGCGGTC AAACCATGAA ATTGTCTGAC
ATCGTTAAGG CGCTTAAAAG CACTTACTGT GGTTCGATTG GTGCTGAATA CATGCACATT
ACCGACACAG ATGAGAAACG TTGGATCCAG CAACGTCTTG AGCCAACCTT AGGTAAGGCT
AACTACGATA AAGACACTAA GAGACGCATT CTCGAAGGGT TGAACGCGGC AGAAGGTATG
GAAAAATACC TAGGCGCTAA GTTCCCCGGT GCTAAGCGTT TCTCCCTTGA AGGCGGCGAT
GCACTCGTGC CTATGATGCG TGAAATTATT TATCGCGCAG GCTCTGCTGG CACTAAAGAA
ATCGTTGTGG GCATGGCTCA CCGTGGTCGC TTAAACCTAT TAGTTAACGT ACTGGGTAAG
CGTCCGGCTG AACTTTTCGA TGAGTTCGCC GGTAAACACA CAGACAGAGA CGGTTCAGGT
GACGTTAAGT ATCACCAAGG TTTCTCGTCT GAATTTGTGA CTCCAGGTGG CAACGTTCAC
TTAGCGCTTG CTTTCAACCC GTCGCATTTA GAAATTGTTA ACCCTGTGGT TATCGGCAGT
GTGCGTGCTC GTCAAGACAG GCTTAATTGC AAAAATGGCC TGCGGGTAAT GCCTATCACT
ATTCATGGTG ACAGCGCTAT TACAGGTCAG GGCATAGTGC AAGAGACATT CAACATGTCT
CAAACCCGCG GCTTTAAAGT GGGCGGTAGC ATACGCATAG TGGTGAACAA CCAAGTGGGC
TTCACTACTT CAAATGCAGC CGATGTGCGC TCAACGGAAT ACTGTACCGA TATCGCTAAG
ATGGTGCAGG CGCCAATTTT CCACGTCAAT GCTGACGATC CTGAAGCGGT TGCCTTTATC
GCCCAGTTGG CGGTTGATTA TCGCAATGAG TTTAAGCGTG ATGTGGTGAT TGATTTAGTC
TGTTACCGCC GTCATGGTCA CAACGAAGCC GATGAGCCTA GTGCGACTCA GCCTTTGATG
TACGCAAAAA TTAAGAAGCA CCCAACGCCG CGTAAGATTT ACGCCGACAA GTTGATTGCT
GAAAATAGCA TTGCCGAAGA AGATGTCACA GGTTTAATCA ACCATTACCG TGATGCGCTG
GATCACGGCG ACTGCGTGGT GAAAGAGTGG CGTCCGATGT CTGAGCGTCC GGTGGATTGG
AGCCCCTACA TAGGTAAAGA TTGGGATGCA CCCTATGACC CGACTATGCC TATTGCGCGG
TTACAGAACT TAGCCAACAA GTTAGTCTCA GTGCCTGAAA GTCACAAACT TCAGTCTCGT
GTGGCGAAAA TTTGTGGTGA TAGAGAAGCC ATGGCGAAGG GCGACAAGCC ACTGGATTGG
GGTTTTGCCG AGACCTTAGC CTATGCCAGT ATCCTAGAAG ACAAGCGCCG GGTGCGCATC
ACAGGTCAAG ATTCTGGCCG TGGTACCTTC TTCCATCGCC ATGCGGTATT GCATAATCAA
AATGATGGCA GTACCTATAT GCCACTGCGC AATATTGCCG ATGAACAAGG CCCGATTGAT
ATCACAGACT CTGTGTTATC AGAAGCCTCA GTGCTGGCGT TCGAATACGG TTATGCCACC
GCAGAGCCGG GTGGTTTAAC GATTTGGGAA GCGCAATTTG GTGATTTCGT CAACTGCGCC
CAAGTGGTTA TTGACCAGTT CTTATCCTCG GGTGAGCAAA AGTGGGGCCG TTTATGTGGC
CTGACTATGT TATTACCCCA TGGTTATGAA GGCCAAGGTC CAGAGCACTC GAGCGCCCGT
TTAGAGCGTT TCCTCCAGCT TTGTGCTAAC CACAATATGC AAGTGTGCGT GCCTTCAACC
CCAGCACAGG TTTACCATAT GCTGCGTCGT CAAGTGGTGC GTCCTATGCG TCGTCCACTG
GTGGTTATGT CGCCTAAGTC GCTACTGCGT CATCCGTTAG CCGTGTCTAG CCTGGAAGAA
TTAGCCGAAG GTAGTTTCCA AAATATCATT GGTGAAATTG ATAGCTTAGA CAGCAGCAAG
GTTGACCGCG TGGTGTTCTG TAGCGGTAAA GTGTATTTCG AATTGCTGGA AAAACGCCGT
AAAGAAAACC TGACCAATAT TGCCATATTA CGTGTTGAGC AGTTATATCC ATTCCCTCAC
GAGGAAATGG TTGCTGCCCT GAACGAATAT CAGCATGTGA CCGATTTTGT CTGGTGTCAG
GAAGAGCCGC AAAACCAAGG CGCTTGGTAC AGCAGTCAGC ATCACTTCTG GAGTGCTATT
CCAGGGACGG CTAAGTTGAC TTATGCCGGT CGTGAAGCGT CTGCGGCGCC AGCTTGTGGT
TACCCAAGCC TGCATGCAGA GCAACAAGAA TCATTAGTGA ATAGTGCGTT AAAACTGTCG
TAA
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| Protein sequence | MHQGIMKAWL ESSHLSGANS TYVEEMYEAY QVDPDSVAAD WRVVFDNLPP VNGASAEVPE
AAHSKVRDYF RSVALAGRLK GAGSVSDPEL DSKQVKVLQL INAHRFRGHQ NANLDPLGLW
KREAVSELDP KFHDFNDEDM QREFNTGSFA LGGQTMKLSD IVKALKSTYC GSIGAEYMHI
TDTDEKRWIQ QRLEPTLGKA NYDKDTKRRI LEGLNAAEGM EKYLGAKFPG AKRFSLEGGD
ALVPMMREII YRAGSAGTKE IVVGMAHRGR LNLLVNVLGK RPAELFDEFA GKHTDRDGSG
DVKYHQGFSS EFVTPGGNVH LALAFNPSHL EIVNPVVIGS VRARQDRLNC KNGLRVMPIT
IHGDSAITGQ GIVQETFNMS QTRGFKVGGS IRIVVNNQVG FTTSNAADVR STEYCTDIAK
MVQAPIFHVN ADDPEAVAFI AQLAVDYRNE FKRDVVIDLV CYRRHGHNEA DEPSATQPLM
YAKIKKHPTP RKIYADKLIA ENSIAEEDVT GLINHYRDAL DHGDCVVKEW RPMSERPVDW
SPYIGKDWDA PYDPTMPIAR LQNLANKLVS VPESHKLQSR VAKICGDREA MAKGDKPLDW
GFAETLAYAS ILEDKRRVRI TGQDSGRGTF FHRHAVLHNQ NDGSTYMPLR NIADEQGPID
ITDSVLSEAS VLAFEYGYAT AEPGGLTIWE AQFGDFVNCA QVVIDQFLSS GEQKWGRLCG
LTMLLPHGYE GQGPEHSSAR LERFLQLCAN HNMQVCVPST PAQVYHMLRR QVVRPMRRPL
VVMSPKSLLR HPLAVSSLEE LAEGSFQNII GEIDSLDSSK VDRVVFCSGK VYFELLEKRR
KENLTNIAIL RVEQLYPFPH EEMVAALNEY QHVTDFVWCQ EEPQNQGAWY SSQHHFWSAI
PGTAKLTYAG REASAAPACG YPSLHAEQQE SLVNSALKLS
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