| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2172 |
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| Symbol | |
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| ID | 4018664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2573537 |
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| End bp | 2575600 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956196 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_563177 |
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| Protein GI | 91793526 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAGCT ATTCTGCTGC GGCATCGTTA ATGTTGTCGC TGGGTGTTAT AGGTCTGAGT
CAGGCGAGTA CTGAGGATTA TCCAGTTGAT GCGCCTGAGC AACACGTCTC CCATGGGCAC
AACGGTCATC AAATACAGCA CACAGATGCT GATGAGCATG ATGAACATGA AGATGAGCAC
GATCACGAAG AGACAATGGA GAAAATTGTT GTGCAAGCCA CCCGTTCAGG GCGGATTGCA
GATGAGCAAC CTATTCGGGT TGAGTTAATT AACCGCGAAG AAATCGAAGA AAAAGCCGCC
ATGAGGCCGG GTAACATTTC TATGTTAGTC GCTGAAACGG GGGGCGTTAG ACTACAAACG
ACTTCACCTG CATTAGGCAG TGCCAATATT CGCTTGCAAG GTTTGTACGG CCGTTATACC
CAGCTGTTAG CCGATGGTTT ACCGCTTTAC GGCAATCAGG CAGGCTCGAT TGGCTTGTTG
CAAATTCCGC CAACCGATCT TAGCCGCGTT GAGATCATTA AAGGCTCGGC TTCATCGCTT
TATGGTGGCT CGGCGCTTGG CGGGGTTATT AACCTAGTAT CTAGAACCCC AAGCGATGAG
CTAAACGGTG AAGTATTGGT GAATGCAACC ACACGTAATG GTCAGGACGT GACCACCTAT
GTTGAAACAC CCCTTAGCGA AAATCTAAAA GGCTCACTGA CAGCGGGCGC GCACCAGCAA
GATGAGCAAG ACATTGATAA AGACGCTTGG ATAGATCTGG CTGGCTATGA GCGATATACC
GTCCGTCCTC GGCTGTTTTG GGAGGGGCAA GCGGGCGAAA CACTGTATCT CACCAGTGGC
TTGATGACAG AGCAGCGCAC CGGCGGCACT ATTGCCGATA ATAAGTTGGC CGATGGTGGC
TCGTTTAAGC AATCCCAAGA TTCCGATAGG TTTGACACAG GTTTAGTCTT TAGTATGCCA
GTGCTTGAGT CACTGACCTT TAATACTCGC GCATCGGCTA TGGTGCAAGA TCATACTCAT
GTGTTTGGCA TCGATATAGA AGAAGATCAA CACCAGAGTT ATTTGCTTGA AAACAGTCTG
GCAGGTTACA CAGATAACAG CGATTGGGTG CTTGGCCTAG CGTATCAGTC AGAGGTATTT
TCATCCAATA CCTTCCCTGA GTTTGATTAC TCCTATGAGG TGCCAGGCGC GTTTGCCCAA
CTTGATTATC AGCATTCTGA GCAAATAACG ACCTCTTACA GCGTACGAGT CGATGAGCAC
AGTGAGTACG GCAGCCAATT TAGTCCAAGG GTGTCGCTAC TTTATCGCCC CAATGATTTA
ACCATAAGAG GCTCTTTTGG GCAGGGCTAT TTTGCCTCCA CGCCGTTTGT AGAAGAGATT
GAAGCCGCGG GTTTATCAAG GCTCGCCCCG ATTGAAAGCT TACAAGAGGA GCGAGCAAAA
ACCGCATCCC TTGATTTCAC TTATCCCTTT GACGATGCCG AAACCAGTTT AACGGTGTTT
GGCTCTGACG TAGATAATGT CACCCAGTTA GAAGCTTTTT CTGTTAACAA CAATGGCACC
CTAGACGCTG TACGGTTAGT TAATGCGACA GGCAAAAGTG AAATACGCGG CGCAGAAGTG
CTGCTGCGTT ATTATTTGGG CGACATTAAG CTTACCGCAA GTTATTTGTA TTTAGATGCT
ACTGAAGAGT CGCTCAATGG TTTCGCTCGA AAAGAAATAG CACTCACCCC ACGTCACTCG
GCTGGTTTTG TGGCGATGTG GGAGCAACAC GGCAATTTTA GAGCAGGTTT TGAAGCCTAC
TATATCGGGA CGCAAACCGT TAACGATAAC CCTTATATTG ATGAGACCGA CCCTTATTGG
CATCTGGGGT TAATGGGCGA AATTACAGTG GGCAGAGTCA GTTGGTTTAT TAATTTAGAA
AACTTACTCG ATATAAAGCA AACCGATGAG CACCCTATGC TGCTACCCAA TAGAGCCCCT
AGCGGCCAAT GGACGACAGA CATTTGGTCT CGAAACGATG GCTTTATCGC CAATGCCGGT
GTAAGAATTA AATTTGGTCA TTAA
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| Protein sequence | MFSYSAAASL MLSLGVIGLS QASTEDYPVD APEQHVSHGH NGHQIQHTDA DEHDEHEDEH
DHEETMEKIV VQATRSGRIA DEQPIRVELI NREEIEEKAA MRPGNISMLV AETGGVRLQT
TSPALGSANI RLQGLYGRYT QLLADGLPLY GNQAGSIGLL QIPPTDLSRV EIIKGSASSL
YGGSALGGVI NLVSRTPSDE LNGEVLVNAT TRNGQDVTTY VETPLSENLK GSLTAGAHQQ
DEQDIDKDAW IDLAGYERYT VRPRLFWEGQ AGETLYLTSG LMTEQRTGGT IADNKLADGG
SFKQSQDSDR FDTGLVFSMP VLESLTFNTR ASAMVQDHTH VFGIDIEEDQ HQSYLLENSL
AGYTDNSDWV LGLAYQSEVF SSNTFPEFDY SYEVPGAFAQ LDYQHSEQIT TSYSVRVDEH
SEYGSQFSPR VSLLYRPNDL TIRGSFGQGY FASTPFVEEI EAAGLSRLAP IESLQEERAK
TASLDFTYPF DDAETSLTVF GSDVDNVTQL EAFSVNNNGT LDAVRLVNAT GKSEIRGAEV
LLRYYLGDIK LTASYLYLDA TEESLNGFAR KEIALTPRHS AGFVAMWEQH GNFRAGFEAY
YIGTQTVNDN PYIDETDPYW HLGLMGEITV GRVSWFINLE NLLDIKQTDE HPMLLPNRAP
SGQWTTDIWS RNDGFIANAG VRIKFGH
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