| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2170 |
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| Symbol | |
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| ID | 4018662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2570284 |
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| End bp | 2571270 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 637956194 |
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| Product | helix-turn-helix, AraC type |
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| Protein accession | YP_563175 |
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| Protein GI | 91793524 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCACTTT ATTTTTCTAG CCCTTTAGTT ATTATTCATT CTGATAACAA TATTTTTGTT
AACCTTATTG GCTGGGGGTA TTTTATTCCG GCTAGCTTTG GTGCATTTTT ATATTTATAT
TGCCGTTCTG CCATCATTGA TAAACCTTTT CATCTTAGTG ATTTTTTACA TTGCACCCCT
TTATTACTCT GTCTGTTCCT CAATCTTGAT TACTTATTAA CGCCACCATT GGAAAAAATT
GATATTGTTA ATAGCGGTCA ACGGGATAGT AATATTGTCA TTTTAACTCA GCTATTAATG
GTGTTGCAGG CATTTTTCTA TTTATGGTTA AGTGTTAAAT TAATTATTAA TTTTAAAAGG
CGAGCGGACA ACTCTCTTTC AGGCTTTAAC CCAAACATAT TTACTTGGTT ATGGGTGTTA
CTAGGCTTGT ACGGAGTCAT TTGGTTGTTA GAAATGTTAG GTCTTGTATT AGGTGGGAAT
TATATTATAT CAGTAGTAAG TGATGTGTTG TTTCTCTTTT TAATTTACAG TATTTCGATG
GCTCAATGGC GAGATCCAAA ATTATTTATC ATTGATGAGT TATTTTTAAT ATCCGTCAAT
GCAAAAGATC AAAAGGCTAA AACGGTAGTA TTTGATAACT GTACTAGACA AAGTTTGCTC
GATAATGTTG TTGGGTTTAT GAATGATAAA AAACCATACT TAGACAATAA TATTACGTTA
GACACTTTGG CAAAATCTAT TGGCCTTAGT AGCCATCATT TGTCTGAAAT ACTGAATCAA
CAGGCAAATA AAAACTTTTA TCAATTCATC AATGAATACA GAATTAACTT TATCTGTGAA
AGTATTGTAG TTGACCCGAA TAGTAAAATT TTAGATTTAG CGATGGCAGG CGGTTTTTCC
TCTAAAAGTA CTTTTAATGC TGTTTTTAAA CAAATGAAAG GCGTGACTCC TACTCAATAC
CGTAATAACT TAAAATATAA CGATTAA
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| Protein sequence | MALYFSSPLV IIHSDNNIFV NLIGWGYFIP ASFGAFLYLY CRSAIIDKPF HLSDFLHCTP
LLLCLFLNLD YLLTPPLEKI DIVNSGQRDS NIVILTQLLM VLQAFFYLWL SVKLIINFKR
RADNSLSGFN PNIFTWLWVL LGLYGVIWLL EMLGLVLGGN YIISVVSDVL FLFLIYSISM
AQWRDPKLFI IDELFLISVN AKDQKAKTVV FDNCTRQSLL DNVVGFMNDK KPYLDNNITL
DTLAKSIGLS SHHLSEILNQ QANKNFYQFI NEYRINFICE SIVVDPNSKI LDLAMAGGFS
SKSTFNAVFK QMKGVTPTQY RNNLKYND
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