| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2161 |
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| Symbol | |
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| ID | 4018653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2559678 |
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| End bp | 2560607 |
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| Gene Length | 930 bp |
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| Protein Length | 309 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956185 |
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| Product | regulatory protein, LysR |
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| Protein accession | YP_563166 |
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| Protein GI | 91793515 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAATCG ATATCGACAG CTTTAATGTG CTGCAAGTGT TGGTGGAGGA GGGCAGTTTT
GCCAAAGCCT CCGAGCGACT GCATAAGGCG CAATCTGCGG TGAGTTATCA AGTTAAAAAG
CTTGAGCAAC ACCTTGGGGT CACCCTGTTT AACCGCGATA AATACCGCGC AGAACTCACC
CCTGAAGGTA AAGTCATTCT TATTGAAGGA CAAAGATTAT TAGAGCAGCT CGCCAATATT
GAACACTTAG CCAGCCGATT TAGCCAAGGA TGGGAGCCAA AGCTCGAGCT GGTGATTGAT
GGCTCTTTGC CCATGGAGCC GATTATGACG GCGCTTAAGC GCATGTCAGA GCATAATGTG
CCCACTAAAA TTCAGCTAAA TATGGAGTTT TTGGGCGGGG TACAACACAG GTTTGAGCGC
GATAAAGCCG ATTTGATGCT GGTTAAGGAT TATCGCAGCG GACCTTATTA TGACGCCAAG
CCTTTGCCGA GCATCACCAG TGTATTAGTG GTGGCGAATA GCCATCCATT AGCGCTATCT
AAAGCAGTAA GCTTGTCCCA GTTACAGCAA CACGTTGAGC TGACCATTGA GGATTCATCC
CCGAGCCGAC TTGGCCGTGA TGAACTGCAA TTTGGCGGTG ATAAAGTGTT TTATTTGTCA
GGGTTTATTA TGAAAAAAAA TGCCTTGCTT AAGGGCCTTG GCTTTGGCTG GATGCCGGAT
TTTTTGATTG GTGAAGAACT TGCGGCTGGT GAGTTGGTCA TGGTGGATTT TATGGGCGGC
AGTCGGTTTA ATTACACCCC GCAATTAGTA TCAACCTTAG CAAGGCCTTT AGGGCGAGCG
GGGCAGTTAT TCACCGAATT AATTCTGCAA GAGTTTGATT TGTTTCATCA AGACTTAGCC
GATGGCAGCA GTGGCTCAGG GCTCGGATAA
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| Protein sequence | MRIDIDSFNV LQVLVEEGSF AKASERLHKA QSAVSYQVKK LEQHLGVTLF NRDKYRAELT
PEGKVILIEG QRLLEQLANI EHLASRFSQG WEPKLELVID GSLPMEPIMT ALKRMSEHNV
PTKIQLNMEF LGGVQHRFER DKADLMLVKD YRSGPYYDAK PLPSITSVLV VANSHPLALS
KAVSLSQLQQ HVELTIEDSS PSRLGRDELQ FGGDKVFYLS GFIMKKNALL KGLGFGWMPD
FLIGEELAAG ELVMVDFMGG SRFNYTPQLV STLARPLGRA GQLFTELILQ EFDLFHQDLA
DGSSGSGLG
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