| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2159 |
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| Symbol | |
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| ID | 4018651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2556353 |
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| End bp | 2558407 |
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| Gene Length | 2055 bp |
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| Protein Length | 684 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956183 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_563164 |
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| Protein GI | 91793513 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA GTTACTTATC GTTAGCCATA GCATCACTGT TATCTGGCCA AGTGTTATCA
GGCCAAGTGT TGGCTGCTGA AGTTCAAGAG TTGGCCGTGA CTGAAGTCAA AGCCACGAAA
ACTAAGCAAA ATACTGTTAC CAGTGAGAAG TTAGACAATC GTCAAGTTAA CGATATCAAA
GGCGCCTTAA GTGAGTTGGC CGGTGTGAGT GTCAGCAATG GCGTACGTTA CAGCCAAAAA
ACCTACCTAC GTGGTATGGA AGAACACTCA GCGAATGTCA CCATAGACGG TGCTCGCCAA
GATGGGCAAA TGTTTCACCA TGCTGGCAAC CAGATGGTCG ACCCAAGCAT GCTAAAAGCG
GTTTCTGTAG AGCTTGGGGC ATCTTCTGTG CTCAGTGGCT ACGGTGCTAA CGTGGGCGCT
ATTTCCTATG TGACTAAAGA TCCAAAAGAT TTATTGGCAT TAGATCAAAA GTTTGGCTTT
AAAGTTGCCA CAGCTGCCGA TACCGCCACT GAATTTCAAC AGGTTAGCGC CAGTGGTTAT
GGCCGGTTAA CAGATCAATT AAGCCTACTT GGAATGATGA GCTGGAATGA GTCTGGCGAT
ATAGAAACCC CAGACCGCAA GCCTATTGTT AATAAGCACA GCGAGCTTAA AAGCGGTTTA
GTTAAAGCGG TTTATGATGT TGATGATAAC CAGCAGTTAG CTGTGTCATT ACAGCGTTTT
GAAGATGCGG GGCATCGTGC CTTGTCTGGT GAAAAACCGG GTGCCACAAG TGTTGAAGAA
GCCTTAGGCT TTAATGGCTA CGAGCGTGAT ACCTATACGG TTAATTATCG CAATGACAGC
GCTAACCCGC TGCTTGATCT GGCCGTTGAT GCTTATTACA ACCAAAAGAA AATGGTGCGT
GGCGAACAAA CTGGTGACTT TGAGATCAGA GACAATGCAG GTAAATGGCA AAAACAAGGC
ATTGAATTTA TCCCTGAGCG TGATTATTCC TATAAAACCT TAGGATTAAA TATCCGCAAC
ACCATGGATA TTAATGATAT TCCTTGGACT GTGGGCATTG AAACCTTTAA ATCTGAACAG
GCTATAGACG CTGCTACTGG GCTTATTACC CGTAACGATG GGACTAAAAC AACAGTGGTG
AGAGCCGTTA ACAATGGCCC TGAAGCACGC CTAATTGGCG GGTATATTCA AGGTGAGTTT
AACCTTGGCG CTTTGCAGAT TATTCCAGGC GTGCGCTTTG ACAGTTACAA GTTAGGCGGC
GCTTACGATA ATTCTTTCAG CCAGCTTTCG CCTAAATTAA ACCTATTTTG GCAAGCGAGC
GAAACCTTAG GGCTAAAAGC TGGATACGGC CGCATCTTTA AGGGCCCAGG TTTACCTGAA
ACCTTGATGA TTTCATCTGA TATGACAGCC TCTCCTGATG CTAAAGCTGA AACCGGCAAT
AACCTTGAGT TCGGTGTGAG TTATGATTTT GCGCCATTAG TTAATCTTGA TAGCGCTAAT
ATTTACGCCA ATATCTATCA GTACAACATA GATAACTATT ATCACCCCAC CAAAAATAAT
AGCCTTGTTC GCGGTATTTC AGACCTGACT AAAAAAGGCA TTGAGGCTGG CATGACTGTC
CAGCATCAAG ATCTTAAAGC CTATGTTAAT TACAGCTATA ACACAGGTGA AAAAGCCTTT
GATGATTACA CCACAGATGA TTACTACTCA GGCACTCACC TAGTCAAACT GGGGCTTGAT
TACCAGTTAA CTGACGAGAT GACGTTAGGC TGGGACAGTA TTTTTGCTAG CAGTGCAAGC
CTTGATGACC GTTCTGTCGC CAATGGTGCT GTGATAACAG AGCCTGTTGA GAAAGCCGGT
TACGGCGTTA GCAATATATG GGCTAGCTAT GATGTTGAAC AGCTTAACGG TTTATCCTTA
AAGCTTGCGG TTGATAACCT GTTTGATAAA GCTTATCAAG ATCACAACAG CTTCGGCATG
TACTGGGGCA ATGCGGGTTA CAACGACAAT GAAGTGGGTC GTAACTTCAA GTTTGCAGTG
AGCTATCAGT ATTAA
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| Protein sequence | MKLSYLSLAI ASLLSGQVLS GQVLAAEVQE LAVTEVKATK TKQNTVTSEK LDNRQVNDIK
GALSELAGVS VSNGVRYSQK TYLRGMEEHS ANVTIDGARQ DGQMFHHAGN QMVDPSMLKA
VSVELGASSV LSGYGANVGA ISYVTKDPKD LLALDQKFGF KVATAADTAT EFQQVSASGY
GRLTDQLSLL GMMSWNESGD IETPDRKPIV NKHSELKSGL VKAVYDVDDN QQLAVSLQRF
EDAGHRALSG EKPGATSVEE ALGFNGYERD TYTVNYRNDS ANPLLDLAVD AYYNQKKMVR
GEQTGDFEIR DNAGKWQKQG IEFIPERDYS YKTLGLNIRN TMDINDIPWT VGIETFKSEQ
AIDAATGLIT RNDGTKTTVV RAVNNGPEAR LIGGYIQGEF NLGALQIIPG VRFDSYKLGG
AYDNSFSQLS PKLNLFWQAS ETLGLKAGYG RIFKGPGLPE TLMISSDMTA SPDAKAETGN
NLEFGVSYDF APLVNLDSAN IYANIYQYNI DNYYHPTKNN SLVRGISDLT KKGIEAGMTV
QHQDLKAYVN YSYNTGEKAF DDYTTDDYYS GTHLVKLGLD YQLTDEMTLG WDSIFASSAS
LDDRSVANGA VITEPVEKAG YGVSNIWASY DVEQLNGLSL KLAVDNLFDK AYQDHNSFGM
YWGNAGYNDN EVGRNFKFAV SYQY
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