Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2144 |
Symbol | |
ID | 4018636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2543577 |
End bp | 2544518 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637956168 |
Product | CheW-like protein |
Protein accession | YP_563149 |
Protein GI | 91793498 |
COG category | [K] Transcription [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain [COG0835] Chemotaxis signal transduction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.00213305 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAG TGCTGGACAC TGTCGATCAA CGAACGAATC TAGTGGGTGA AAACCGCCTA GAGCTTCTAC TCTTTAGGAT TAATTCGACC CAGCTCTTCG CTATTAACGT ATTTAAAGTC AAAGAAGTGG TTAAACTTCC TCGTCTCAGT GCTATGCCTG GCAGTAATCC CAATGTTGCA GGAGTGGCTA ATATTCGTGG TCACTCAATA CCTGTGATTA ATCTTCGTGG CGCCATAGGA TTTAGCCAAA TGCCCATCAC AGAAGATTCT AATTTAATCA TTACTGAGTA TAACCGCAGC ATCCAAGGCT TCCTGGTGGG AAAAGTTGAG CACATAGTCA ACATGACCTG GGGCGACATT ATGCCGCCAC CCAAAACCGC GGGCTCTCAC AATTACCTCA CTGCAATTAC TCGACTGGAA GAACAGGGGC AATCCCAATT GGTTTCCATT ATTGATGTGG AAAAAGTATT AGCTGAAATC ATTAACTATG ATATTCGTCT TTCTGATGGC GTATTGGATG AGACGCTGGC GCCTGAGATG CCAGGGCGTA AAATTCTCAT TGTTGATGAC TCTTCAACGG CAAGGCGTCA GGTACGAGAA ACACTGGGGC AACTAGGGAT AGAAATTATC GAAGCATCAG ATGGTTTGCA GGCGCTTAAT TTACTTAAGT CCTGGAGCGA TCAAGGTAAA GATGTCACTC AAGAATTGCT GATGATGATA ACTGACGCAG AAATGCCTGA GATGGACGGC TATAAGCTGA CTGCGGAGGT GAGGGCGGAT CCAAGAATGG CGGCACTTTA CATTACCCTT AATACTTCAT TGAGTGGCAG CTTTAATCAT GCCATGGTGG AGAAAGTCGG CTGCGATCAA TTCATCTCTA AATTCCAACC TGATTTATTG GTCGGCGTGG TGCAGACTCG GTTACGTCAA ATTCTGGGTT AA
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Protein sequence | MKKVLDTVDQ RTNLVGENRL ELLLFRINST QLFAINVFKV KEVVKLPRLS AMPGSNPNVA GVANIRGHSI PVINLRGAIG FSQMPITEDS NLIITEYNRS IQGFLVGKVE HIVNMTWGDI MPPPKTAGSH NYLTAITRLE EQGQSQLVSI IDVEKVLAEI INYDIRLSDG VLDETLAPEM PGRKILIVDD SSTARRQVRE TLGQLGIEII EASDGLQALN LLKSWSDQGK DVTQELLMMI TDAEMPEMDG YKLTAEVRAD PRMAALYITL NTSLSGSFNH AMVEKVGCDQ FISKFQPDLL VGVVQTRLRQ ILG
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