| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2141 |
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| Symbol | |
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| ID | 4018633 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2540998 |
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| End bp | 2542311 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956165 |
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| Product | lytic murein transglycosylase |
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| Protein accession | YP_563146 |
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| Protein GI | 91793495 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
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| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000000451146 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTTTTGA CTGTGGACAG GCTTGTTTCC TTTTGCACTA TCAGTCAGGA TACTGACTTT
GGACTGGTTA TCAAAAGTAG TAACGAAATG GCGAGTTTAC AAGGTGTTTT TAATAAGCGT
TTTTCTGTCT TATTGAGTCT GGGTGTCATG GCGAGTCTGC TTGGTTCTAG CAGCACTTTG
GCGGCCAATG ATGAGTTTTC TCTGTGTGTG AATAAACTGC AAGATACCGC CCGTCAGCGG
GGGGTGTCTG AGCACATAAT AGAATCAAGC TTAGCCAAGG TTAAATTTGT TGATAAAGTC
ATTGCTCTGG ATGGGCAACA GCCGGAATTT AGCACAAGTT TTGCTGATTA CTTCGAAAAA
CGCGTCACCC CATGGAGAGT GGAACAAGGG CGTAAATATT TTGCTATTCA TCGTGAGTTA
CTTAACCAGT TAACTCAAAA ATATGGCGTG CCAGGGCAGT ACATCATGGC TTTTTGGGGG
CTGGAGACCA ACTTTGGCAG CTATAAAGGC AGCATGCCGG TATTGGATTC CCTTGCCACC
TTGGCCTGTA ATCCGAGACG AGCCGAGTAC TTTACCGCAG AGTTGATGCA AGCACTCAAA
TTACAAGAAA AATATCAGTT TAATAGCCGT GATATGGTGG GCTCTTGGGC TGGCGCTATG
GGGCATACGC AATTTATGCC CACCACCTAT GCCAATCATG CTGTCGACGG TGATGGTGAC
GGTAAAGTTG ACCTGTGGAA TAGTGTTGCT GATGGGCTAA CATCGGCGGC AAACTTTCTA
CATAGCTTGG GTTGGAAAGA AAATGAGCGC TGGGGCAGGG AAGTTATCTT ACCCACAAAT
TATTCCTATG AGTACCTAGG CAGTAAAGAT GTGTTAGCCC TTGAGAAGTG GGCAAGCCTT
AATATTCGTC AGGTGAATAA TGCACCTTTG AACGTGGCTG ATATGCAAGC TGCACTTTAC
CTACCCGCGG GTCATAGCGG GCCTGCCTTC TTGGGTTACC ATAATTTTGA TGTGATCATG
CGTTGGAATC GCTCAGAATT TTATGCCATT TCTGTGGGAC ATCTCGCCGA CAGGATAAAT
GGTGCCAATG AGCTTAAAGT CAGTGCCCCT AACCAAGCTA GGTTTAACCG AAGCGTGATT
AAAGCATTAC AAGAAAAACT GAACCAACTT GGCTTTGATG TGGGTGAACC TGATGGGGTG
CTTGGACGAA ATTCAATGGC AGGATTACAA GCGTTTCAGC GCAGTAAGGG TCTTATCGCC
GATGGTTACC CAGGGCAAAG TACCTTTAAT GCTTTAGGTT TGCCCCAAAG TTAA
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| Protein sequence | MLLTVDRLVS FCTISQDTDF GLVIKSSNEM ASLQGVFNKR FSVLLSLGVM ASLLGSSSTL
AANDEFSLCV NKLQDTARQR GVSEHIIESS LAKVKFVDKV IALDGQQPEF STSFADYFEK
RVTPWRVEQG RKYFAIHREL LNQLTQKYGV PGQYIMAFWG LETNFGSYKG SMPVLDSLAT
LACNPRRAEY FTAELMQALK LQEKYQFNSR DMVGSWAGAM GHTQFMPTTY ANHAVDGDGD
GKVDLWNSVA DGLTSAANFL HSLGWKENER WGREVILPTN YSYEYLGSKD VLALEKWASL
NIRQVNNAPL NVADMQAALY LPAGHSGPAF LGYHNFDVIM RWNRSEFYAI SVGHLADRIN
GANELKVSAP NQARFNRSVI KALQEKLNQL GFDVGEPDGV LGRNSMAGLQ AFQRSKGLIA
DGYPGQSTFN ALGLPQS
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