Gene Sden_2138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2138 
Symbol 
ID4018630 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2539270 
End bp2539974 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content46% 
IMG OID637956162 
Productcarboxylesterase 
Protein accessionYP_563143 
Protein GI91793492 
COG category[R] General function prediction only 
COG ID[COG0400] Predicted esterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000145278 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAACCTT CTATAAATAC AGATAAAGCG AATCAATTTT CAAGCAAACT TGAGCGTATC 
ACGGTAGAAC CTAGCTTACC GGCAAATGCT TGTGTTATTT GGCTTCATGG CTTAGGTGAT
TCTGGTGCGG GCTTTGCGCC TGTGGTGCCC GTATTAGGTT TACCCGCTGA TCACCGTATT
CGCTTTGTCT TCCCCCATGC GCCAGAGCAA GCAGTGACCA TTAATGGTGG TTATCAGATG
CGCGCCTGGT ATGACATAAA ATCCATGGAT TTACACGATA GAGCAGACTT AGCCGGCGTG
TTAGCATCAG ATATCGCCAT TAAATCTCTT ATCCAAGAAC AAATAGACCA AGGCATAGCG
GCCGAAAAAA TCGTGTTGGC AGGTTTTAGC CAAGGCGGGG TAATGAGTTT ATTTAGCGGA
CTTAGGTTTG AGCAAAAACT GGCAGGTATT ATGGCGCTTT CTTGCTACTT ACCTGGCGGT
GACAAGTTAC CAGATGCTCT CAGTGAAGCC AATAAAGTCA CACCAATTTT ACAGCATCAC
GGCGAGCAAG ATGATGTCGT GCCTTTATTT GCAGGCAAGA TGGCTCATGA TGCATTGCTT
AATGCCGGTT ATCAAACCCA ATGGAAGACT TACTCTATGC CCCATAGTGT ATTACCGAAT
CAATTAACTG AAATTGGCCA GTGGTTGCAG GCGAGACTTG GCTAA
 
Protein sequence
MQPSINTDKA NQFSSKLERI TVEPSLPANA CVIWLHGLGD SGAGFAPVVP VLGLPADHRI 
RFVFPHAPEQ AVTINGGYQM RAWYDIKSMD LHDRADLAGV LASDIAIKSL IQEQIDQGIA
AEKIVLAGFS QGGVMSLFSG LRFEQKLAGI MALSCYLPGG DKLPDALSEA NKVTPILQHH
GEQDDVVPLF AGKMAHDALL NAGYQTQWKT YSMPHSVLPN QLTEIGQWLQ ARLG