Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2138 |
Symbol | |
ID | 4018630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2539270 |
End bp | 2539974 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956162 |
Product | carboxylesterase |
Protein accession | YP_563143 |
Protein GI | 91793492 |
COG category | [R] General function prediction only |
COG ID | [COG0400] Predicted esterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000145278 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACCTT CTATAAATAC AGATAAAGCG AATCAATTTT CAAGCAAACT TGAGCGTATC ACGGTAGAAC CTAGCTTACC GGCAAATGCT TGTGTTATTT GGCTTCATGG CTTAGGTGAT TCTGGTGCGG GCTTTGCGCC TGTGGTGCCC GTATTAGGTT TACCCGCTGA TCACCGTATT CGCTTTGTCT TCCCCCATGC GCCAGAGCAA GCAGTGACCA TTAATGGTGG TTATCAGATG CGCGCCTGGT ATGACATAAA ATCCATGGAT TTACACGATA GAGCAGACTT AGCCGGCGTG TTAGCATCAG ATATCGCCAT TAAATCTCTT ATCCAAGAAC AAATAGACCA AGGCATAGCG GCCGAAAAAA TCGTGTTGGC AGGTTTTAGC CAAGGCGGGG TAATGAGTTT ATTTAGCGGA CTTAGGTTTG AGCAAAAACT GGCAGGTATT ATGGCGCTTT CTTGCTACTT ACCTGGCGGT GACAAGTTAC CAGATGCTCT CAGTGAAGCC AATAAAGTCA CACCAATTTT ACAGCATCAC GGCGAGCAAG ATGATGTCGT GCCTTTATTT GCAGGCAAGA TGGCTCATGA TGCATTGCTT AATGCCGGTT ATCAAACCCA ATGGAAGACT TACTCTATGC CCCATAGTGT ATTACCGAAT CAATTAACTG AAATTGGCCA GTGGTTGCAG GCGAGACTTG GCTAA
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Protein sequence | MQPSINTDKA NQFSSKLERI TVEPSLPANA CVIWLHGLGD SGAGFAPVVP VLGLPADHRI RFVFPHAPEQ AVTINGGYQM RAWYDIKSMD LHDRADLAGV LASDIAIKSL IQEQIDQGIA AEKIVLAGFS QGGVMSLFSG LRFEQKLAGI MALSCYLPGG DKLPDALSEA NKVTPILQHH GEQDDVVPLF AGKMAHDALL NAGYQTQWKT YSMPHSVLPN QLTEIGQWLQ ARLG
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