| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2137 |
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| Symbol | ushA |
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| ID | 4018629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2537177 |
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| End bp | 2538892 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637956161 |
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| Product | bifunctional UDP-sugar hydrolase/5'-nucleotidase periplasmic precursor |
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| Protein accession | YP_563142 |
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| Protein GI | 91793491 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.00000000210765 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACACA CTTTACTTAA AGGTCTAGTT GCTACTGCAG TACTTGCAGC ACTTACAGGT
TGCGGCACTG AAGATGAGAA AGCACCAGTG GCTCCGACAC CAACGACTTG TGCGGAAGCG
GGTAATGCAT GTAAGACATT CACTGTACTG CATACTAACG ATAACCACGG CCGTTTTTGG
GCAAACAAAG ATGGCGAATA CGGTATGGCG GCACGTAAGA CGCTTATCGA TTCAATTCGC
GCTGAAGTGT CAAAAGCGGG CGGCGAAACC TTATTGTTAT CTGGTGGTGA CATCAACACG
GGTGTTCCTG AATCAGATTT ACAAGATGCA GTGCCAGATT TCATTGGTAT GAATGAAATT
GGTTACGATG CTATGGCTGT GGGTAACCAC GAATTTGACA ACCCATTAGC AGTGTTAGAT
TCACAGCGTT CAATCGCTAA CTTCCCAATG CTTGCTGCTA ACATCTATAA GAAAGATGGC
ACTCGTTATT TTGATGCTTA TAAAGTATTT GATGTTAATG GCGTTAAAAT TGCTGTTATC
GGTCTAACTA CTGAAGATAC GGCTAAGATA GGTAACCCAG AATTTATCAG TGATCTCACC
TTTACCGATC CAAAAGTTGA AATCGCTAAA GTGATCAAAG AAATTAAAGA AGCCAAAACT
GCTGACTTGA TTTTCGCGAC GACACATATG GGTCACTATG CTGATGGCAA AAATGGCAGC
AACGCTCCTG GCGATGTGGC CATGGCGCGT GCATTGACTC AAGGTGATCT ACAAGCCGTT
ATCGGTGGTC ACTCGCAGAA CCCAGTGTGT ATGGAACCTG GTACCAATAA TTACAGTGAA
ACATTTGAAC CAGGTGGTGA ATGTACCCCT GATATGCAAA ATGGCACTTA CATTATGCAA
GCACACGAAT GGGGTAAGTA TGTTGGCCGC GCCGACTTTG AATACTTCAA TGGCCAAATG
CACTTAAAGA GTTATAAGTT AATCCCTGTT AATTTAGTGA AAGAAGTTAC TGATGATGCG
GGTAAAAAGA GCAAAGTACT CATCGCTGAT AAGATTGAAG AGGATGCAGC ACTAAGAGAG
TTGCTTAAGT ACTACCAAGA TCAAGGTAGT GCTAAATTAG GCGAAGTGAT TGCAACCACT
GATGCATTAC TGGATGGTGC GCGTGGGAAT GTACGTAACA TGCAAACTAA CTTAGGTCGC
CTTCTTGCAG ATGCACAGCG TACTAAAGTG AAAGCTGATA TAGGTGTAAT GAACTCTGGT
GGTGTGCGTG CTTCTATCGC TGCTGGCAAC ATTTCGTACC GTGACGTATT AACCGTGCAG
CCTTTTGGCA ACATGGTGAC CCTAAGCACT ATGACTGGTG CTGAAATCAC CAGTTATTTG
AATACTGTCG CGACCTTCCA ACGTGGTTCT GGTGCCTATG CTCAAATCAC AGGTGTTAAA
ATGACAGTCG ATTGTGCTGC AAGCACAGTG GCTATCAGTG AAATCAATGG CAAGACTTAT
AGTGCCACTG ATTCATACAC CTTCACAGTG CCAAGCTTTA ACGCTGCGGG CGGAGACGGA
TATCCAAAAC TTAGTCCAGT CCAAACTGGC TATGTTGATG CTGAAGTGCT TTATACTTTC
TTAAAAGATA AAGGAAGCAT AGTAGCGGGT GATTATGCGC CTATGGGTGA CATAGTTTAT
ACCAACTCTA CTAGCACTTT AGGTTGTTCA CTATAG
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| Protein sequence | MKHTLLKGLV ATAVLAALTG CGTEDEKAPV APTPTTCAEA GNACKTFTVL HTNDNHGRFW
ANKDGEYGMA ARKTLIDSIR AEVSKAGGET LLLSGGDINT GVPESDLQDA VPDFIGMNEI
GYDAMAVGNH EFDNPLAVLD SQRSIANFPM LAANIYKKDG TRYFDAYKVF DVNGVKIAVI
GLTTEDTAKI GNPEFISDLT FTDPKVEIAK VIKEIKEAKT ADLIFATTHM GHYADGKNGS
NAPGDVAMAR ALTQGDLQAV IGGHSQNPVC MEPGTNNYSE TFEPGGECTP DMQNGTYIMQ
AHEWGKYVGR ADFEYFNGQM HLKSYKLIPV NLVKEVTDDA GKKSKVLIAD KIEEDAALRE
LLKYYQDQGS AKLGEVIATT DALLDGARGN VRNMQTNLGR LLADAQRTKV KADIGVMNSG
GVRASIAAGN ISYRDVLTVQ PFGNMVTLST MTGAEITSYL NTVATFQRGS GAYAQITGVK
MTVDCAASTV AISEINGKTY SATDSYTFTV PSFNAAGGDG YPKLSPVQTG YVDAEVLYTF
LKDKGSIVAG DYAPMGDIVY TNSTSTLGCS L
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