| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2136 |
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| Symbol | |
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| ID | 4018628 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2534423 |
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| End bp | 2537032 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637956160 |
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| Product | chitinase |
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| Protein accession | YP_563141 |
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| Protein GI | 91793490 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3325] Chitinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000620509 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTCAAGA CTCAAATATC ATCATCAGCT TGGCTGGTGG CATCTGTGCT AGCATCGACC
ATAAGTAGCG CTGCATTCGC AGCGGCGCCC GGTAAACCTA GCTTAGCTTG GGGTGAGACT
CAGTTCGCCA TTATCGACGT CAATCAATCA GCTACGGCTT ATAATCAACT CGTAACAGTA
AAAGATGCCG CCGCAGTCTC CGTCAGCTGG AGCCTCTGGA GTGGTAACGT GGGTGAACGC
GCCCAAGTGT TACTCAATGG CAATCAAGTG TGGGAAGGCG CATCAAGTGC TTCTGGCACG
GCGAACTTTA ACGTTAACGA GGGGGGCCGT TATCAGATGC AAGTGCAGCT GTGTAACAGT
GAAGGCTGTA CAGCCAGCGA TCCCAAAACG ATTATTGTCG CCGATACCGA TGGCAGCCAC
CTATTGCCAC TCAATGCACC ATTATTAGAG AATAACCGCC CCTATACCAA CCATTCTGGC
AAAGTGGTCG GCAGTTACTT TGTGGAATGG GGCGTCTATG GCCGCACATT TCCAGTGGAT
AAGATGCCAG CTCAAAACTT AACCCATGTG CTCTATGGTT TTACCCCCAT ATGTGGTGGT
GATGGCATTA ATGACAGCCT AAAAGAAATT GAAGGCAGTT TTCAAGCATT GCAACGGGCC
TGTAGCGGCC GTGCGGATTT TAAAGTCGCC ATTCACGATC CTTGGGCGGC AATTCAAAAA
CCTCAGTCGG GTGTGAGTGG CCATGCAGAC CCCTATAAGG GCAACTTCGG TCAATTGATG
GCACTCAAGC AGGCGCACCC AAATTTAAAA ATATTACCTT CGGTCGGTGG CTGGACCCTG
TCCGATCCTT TCTTCTTCTT AGGCGATAAA ACCAAACGCG ACACTTTCGT GGCTTCGGTG
AAGGAATTTC TACAAACCTG GAAATTCTTC GATGGCGTTG ACATAGACTG GGAATTCCCC
GGTGGTAGTG GCGCCAACCC TAACTTAGGT AATGCTAACG ACGGTGAAAC CTATGTCACT
CTGATGCGTG AACTGCGCGC CATGCTCGAT GAACTGAGCG CCGAAACCGG CCGTACCTAT
GAGCTAACCT CAGCCATCAG CGCCGGTGGC GATAAAATCC AGAAAGTCGA TTATCAGGCG
GCGCAGCAGT ATATGGATTA CATCTTCTTG ATGAGCTACG ACTTCAATGG CGGCTGGACT
AACACTGAAC TTGGACACCA AACCAACCTC TATGAGGCAA GTTGGGATCC CAATACCCGT
TACACCACAG ATAAAGGGGT AAAAGCCCTG TTAGGCCAAG GCGTTACCCC AGGTAAGATA
GTGGTTGGCG CCGCCATGTA CGGCCGTGGC TGGACTGGGG TAAATGGCTA CACCAGCAAT
AACCCCTTCA CGGGCACGGC GACAGGAAAA GTGAAAGGCA CCTGGGAGGA TGGCGTCGTG
GATTATCGCC AAATCGTTAA TAGCTACATG GGCAGCGGCT GGGCCTACAG CTATGATGAG
GTTGCCGAAG CTGCATCGGT ATTTAAGGCA TCAACCGGCG ACTTAATTAC CTTTGACGAC
TCGCGCTCAG TCAAAGCCAA GGGCCAATAT GTGCTCGCCA ATCAACTCGG TGGACTCTTT
GCATGGGAAA TAGATGCCGA TAACGGTGAC ATACTCAATG CCATGCACGA AGGGTTAGGT
AATGGTGAAG GCACGACGCC ACCTGTAAAT AAAGCACCCA TAGCCAATGC GGGCGCGGAT
GTGAATGTTA CAGGCCCAGC GGATGTGATG CTTAATGGTA GCGCATCAAG GGACCCTGAA
AATGCCATTC TCAGTTACCT TTGGACTCAA GTATCAGGGC CAGCAGTCAC AATCATAAAC
CCTAATATGG CAAAGGCATC GATTCAATTA GCCTCAACAC AGGCCAGTAT CACTTATGGT
TTTAGCCTTA AGGTGACAGA TCCACAAGGC CTATCGGCAA CAGATACTGT GCTTGTCACC
AACCGGGCCG CGACACCTAA CCAAGCCCCA GTGGTGAGTG TCACCGCCAG CGCGACGGTC
GAAGCGGGAA AAGTGCTCAG CATAGTCGCA AGCGCCTCAG ATCCTGACGG TGATCCCCTC
ACCTACGCTT GGACTGTCCC TGCTGGTATT TCGGCAACGG GGCAAAATAG CACCACTTTA
GTGGTAACTG GGCCCAATGT CACAGCAGCC ACCAGCTACG ACTTGAGTTT ATTGGTTTCC
GATGGCGCTT TAGATGCGAG CGCAGCCACT AAGCTAACAG TGACGCCTAA ACCGACGGGA
GGCTGTGATA TAACAGATCC GAATGCGGGC AATTATCCTG CTTGGCAAGC CAGCACAGTT
TATAACGCAG GCAATACCGT TAGTCACAGC GCACTCGTGT GGAAAGCTAA ATATTGGACT
CAAGGCAATC CCCCCTCTCG CACCGCAGAT CAATGGCAGT TGCTCAGCCA AGTACAGTTA
GGTTGGGATG CAGGCGTTGC CTATAACGGT GGTCAAACCA CCACCCATAA CGGTCGTGAG
TGGAAGGCGA GTTATTGGAC CAAAGGTGAT GTACCTGGCG TTGCTGCTGT GTGGGTGGAT
ATCGGTGAAG CTCGCTGTCA GTCACGTTAA
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| Protein sequence | MFKTQISSSA WLVASVLAST ISSAAFAAAP GKPSLAWGET QFAIIDVNQS ATAYNQLVTV
KDAAAVSVSW SLWSGNVGER AQVLLNGNQV WEGASSASGT ANFNVNEGGR YQMQVQLCNS
EGCTASDPKT IIVADTDGSH LLPLNAPLLE NNRPYTNHSG KVVGSYFVEW GVYGRTFPVD
KMPAQNLTHV LYGFTPICGG DGINDSLKEI EGSFQALQRA CSGRADFKVA IHDPWAAIQK
PQSGVSGHAD PYKGNFGQLM ALKQAHPNLK ILPSVGGWTL SDPFFFLGDK TKRDTFVASV
KEFLQTWKFF DGVDIDWEFP GGSGANPNLG NANDGETYVT LMRELRAMLD ELSAETGRTY
ELTSAISAGG DKIQKVDYQA AQQYMDYIFL MSYDFNGGWT NTELGHQTNL YEASWDPNTR
YTTDKGVKAL LGQGVTPGKI VVGAAMYGRG WTGVNGYTSN NPFTGTATGK VKGTWEDGVV
DYRQIVNSYM GSGWAYSYDE VAEAASVFKA STGDLITFDD SRSVKAKGQY VLANQLGGLF
AWEIDADNGD ILNAMHEGLG NGEGTTPPVN KAPIANAGAD VNVTGPADVM LNGSASRDPE
NAILSYLWTQ VSGPAVTIIN PNMAKASIQL ASTQASITYG FSLKVTDPQG LSATDTVLVT
NRAATPNQAP VVSVTASATV EAGKVLSIVA SASDPDGDPL TYAWTVPAGI SATGQNSTTL
VVTGPNVTAA TSYDLSLLVS DGALDASAAT KLTVTPKPTG GCDITDPNAG NYPAWQASTV
YNAGNTVSHS ALVWKAKYWT QGNPPSRTAD QWQLLSQVQL GWDAGVAYNG GQTTTHNGRE
WKASYWTKGD VPGVAAVWVD IGEARCQSR
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