Gene Sden_2132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2132 
Symbol 
ID4018624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2529823 
End bp2531007 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content47% 
IMG OID637956156 
ProductDegT/DnrJ/EryC1/StrS aminotransferase 
Protein accessionYP_563137 
Protein GI91793486 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000218934 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGGTT TTGAATTATT TGGTCCAGAA GAAAAGCAAG AAGTTGCTGA CGTAATGGAA 
AACGGTTTCA CCTTCCGTTA CAACTTCGAC CATATGCGTA ATGATCGCTG GAAAACCCGC
GACATGGAGC AGCTATTGTG TGAAAAAATG GGCGTTAAGC ACGCGCATTT ATTATCAAGT
GGTACTGCTG CACTGCAAAC GGCCATGGCC GCTGCTGGCA TAGGCGCAGG CGATGAAGTT
ATCGTACCGC CATTTACCTT TGTCGCGTCT GTAGAAGCGG TATTTATGGC TGGCGCCATC
CCGATTTTCG CTGAAATTGA TGAAACCTTA TGTTTGTCCC CTGAAGGCAT AGAAGCGGCT
ATCACCCCGC GCACTAAAGC GGTTAATTTA GTGCAGATGT GTGGTTCTAT GGCCAAAATG
GATGAAATCA AAGCTGTGTG TAAGAAACAC AACTTGATCA TTCTCGAAGA TGCCTGCCAA
GCCATTGGCG CAAGCTACAA AGGTCAAGCA TTAGGGACTA TCGGTGATGT TGGTTGTTAC
TCTTTTGATT CGGTAAAAAC CGTCACCTGT GGTGAAGGTG GCGCTGTGGT GACGAACAAC
ACTGAAATCT ACAACCACTC GCACATGTTC TCTGATCACG GTCATGACCA TGTAGGTAAC
GATCGCGGCG CAGAAGGTCA CCCTATCATG GGTCTGAACT TCCGTATTTC TGAAATGAAT
GCCGCTGTGG GATTAGCCCA GTTACGTAAA CTTGATAAAA TCATCGCCAT TCAGCGTAAA
AACAAGAAGC TTATCAAGGA TGCCATGATG CAAATCCCTG AGCTAAGCTT CCGTGAATTG
CCCGATCCAG AAGGTGATTC AGCCGGTTTC TTAACCTTTA TGATGCCAAC TGAAGCCCGT
ACCCTAGAAA TCAACAAGAA ATTAGCCGAG AACAAGGTTG ATGGTTGTTT CTACTGGTAC
ATTAACAATT GGCATTACCT TAAAAACTGG AAGCACATCC AAGAGCTTAA AGCTCCTGCT
GCGCTGCCGA TCATGCTGAT CGCCGACCGC CCTGATTACA CTCAAATCAA GACGCCAAAA
TCTGATGCCA TCATGAGCCG CACTATCTCT ATGCTTATCA AGCTGTCTTG GACCGATGAG
CAAATCCTTG AGCGCATCGA GAACATCAAA CGCGCCTTTG CGTAA
 
Protein sequence
MPGFELFGPE EKQEVADVME NGFTFRYNFD HMRNDRWKTR DMEQLLCEKM GVKHAHLLSS 
GTAALQTAMA AAGIGAGDEV IVPPFTFVAS VEAVFMAGAI PIFAEIDETL CLSPEGIEAA
ITPRTKAVNL VQMCGSMAKM DEIKAVCKKH NLIILEDACQ AIGASYKGQA LGTIGDVGCY
SFDSVKTVTC GEGGAVVTNN TEIYNHSHMF SDHGHDHVGN DRGAEGHPIM GLNFRISEMN
AAVGLAQLRK LDKIIAIQRK NKKLIKDAMM QIPELSFREL PDPEGDSAGF LTFMMPTEAR
TLEINKKLAE NKVDGCFYWY INNWHYLKNW KHIQELKAPA ALPIMLIADR PDYTQIKTPK
SDAIMSRTIS MLIKLSWTDE QILERIENIK RAFA