Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2132 |
Symbol | |
ID | 4018624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2529823 |
End bp | 2531007 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956156 |
Product | DegT/DnrJ/EryC1/StrS aminotransferase |
Protein accession | YP_563137 |
Protein GI | 91793486 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000000218934 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGGTT TTGAATTATT TGGTCCAGAA GAAAAGCAAG AAGTTGCTGA CGTAATGGAA AACGGTTTCA CCTTCCGTTA CAACTTCGAC CATATGCGTA ATGATCGCTG GAAAACCCGC GACATGGAGC AGCTATTGTG TGAAAAAATG GGCGTTAAGC ACGCGCATTT ATTATCAAGT GGTACTGCTG CACTGCAAAC GGCCATGGCC GCTGCTGGCA TAGGCGCAGG CGATGAAGTT ATCGTACCGC CATTTACCTT TGTCGCGTCT GTAGAAGCGG TATTTATGGC TGGCGCCATC CCGATTTTCG CTGAAATTGA TGAAACCTTA TGTTTGTCCC CTGAAGGCAT AGAAGCGGCT ATCACCCCGC GCACTAAAGC GGTTAATTTA GTGCAGATGT GTGGTTCTAT GGCCAAAATG GATGAAATCA AAGCTGTGTG TAAGAAACAC AACTTGATCA TTCTCGAAGA TGCCTGCCAA GCCATTGGCG CAAGCTACAA AGGTCAAGCA TTAGGGACTA TCGGTGATGT TGGTTGTTAC TCTTTTGATT CGGTAAAAAC CGTCACCTGT GGTGAAGGTG GCGCTGTGGT GACGAACAAC ACTGAAATCT ACAACCACTC GCACATGTTC TCTGATCACG GTCATGACCA TGTAGGTAAC GATCGCGGCG CAGAAGGTCA CCCTATCATG GGTCTGAACT TCCGTATTTC TGAAATGAAT GCCGCTGTGG GATTAGCCCA GTTACGTAAA CTTGATAAAA TCATCGCCAT TCAGCGTAAA AACAAGAAGC TTATCAAGGA TGCCATGATG CAAATCCCTG AGCTAAGCTT CCGTGAATTG CCCGATCCAG AAGGTGATTC AGCCGGTTTC TTAACCTTTA TGATGCCAAC TGAAGCCCGT ACCCTAGAAA TCAACAAGAA ATTAGCCGAG AACAAGGTTG ATGGTTGTTT CTACTGGTAC ATTAACAATT GGCATTACCT TAAAAACTGG AAGCACATCC AAGAGCTTAA AGCTCCTGCT GCGCTGCCGA TCATGCTGAT CGCCGACCGC CCTGATTACA CTCAAATCAA GACGCCAAAA TCTGATGCCA TCATGAGCCG CACTATCTCT ATGCTTATCA AGCTGTCTTG GACCGATGAG CAAATCCTTG AGCGCATCGA GAACATCAAA CGCGCCTTTG CGTAA
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Protein sequence | MPGFELFGPE EKQEVADVME NGFTFRYNFD HMRNDRWKTR DMEQLLCEKM GVKHAHLLSS GTAALQTAMA AAGIGAGDEV IVPPFTFVAS VEAVFMAGAI PIFAEIDETL CLSPEGIEAA ITPRTKAVNL VQMCGSMAKM DEIKAVCKKH NLIILEDACQ AIGASYKGQA LGTIGDVGCY SFDSVKTVTC GEGGAVVTNN TEIYNHSHMF SDHGHDHVGN DRGAEGHPIM GLNFRISEMN AAVGLAQLRK LDKIIAIQRK NKKLIKDAMM QIPELSFREL PDPEGDSAGF LTFMMPTEAR TLEINKKLAE NKVDGCFYWY INNWHYLKNW KHIQELKAPA ALPIMLIADR PDYTQIKTPK SDAIMSRTIS MLIKLSWTDE QILERIENIK RAFA
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