| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2122 |
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| Symbol | |
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| ID | 4018614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2520809 |
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| End bp | 2522527 |
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| Gene Length | 1719 bp |
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| Protein Length | 572 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956146 |
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| Product | acetolactate synthase 3 catalytic subunit |
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| Protein accession | YP_563127 |
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| Protein GI | 91793476 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | [TIGR00118] acetolactate synthase, large subunit, biosynthetic type |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAATGT TATCCGGCGC TAGTATGATA GTGCGCTCTC TTATTGACGA AGGTGTCGAA
CACATCTTTG GCTATCCCGG TGGTTCAGTC TTAGATATTT ATGACGCCCT TCACGAAATC
TCAGGCGTGG AGCACATTTT AGTGCGTCAC GAGCAAGCCG CGGTGCACAT GGCCGATGGT
TATGCCAGAG CGACTGGTAA GGTTGGCGTG GTGCTGGTGA CATCAGGCCC TGGCGCCACC
AATGCCATCA CAGGTATTGC TACCGCATAT ATGGACTCCA TCCCGTTAGT TGTCTTGTCA
GGTCAAGTAC CCAGCAATTT AATTGGCAAT GATGCCTTCC AAGAATGTGA CATGATTGGG
ATTTCACGCC CTGTGGTGAA ACACAGCTTT TTGGTGACTG ATCCCGCCAA AATCCCTGAA
ACCATCAAAA AAGCCTTTTA TATCGCCAGC ACTGGTCGAC CCGGCCCTGT GGTGGTTGAT
TTACCCAAAG ATTGTTTAAA CCCACAAGTG CTGCACGAAT ATGCTTACCC TGAGTCGGTC
AGCATGCGCT CTTACAATCC TACGACCATG GGCCATAAAG GCCAGATAAA ACGCGGTTTA
CAAGCGCTTA TTCAAGCGAA AAAACCTGTG CTTTATGTAG GCGGCGGCGC GGTGATTTCA
GGCTGTGATA AGCAAATATT ATCGCTGTCA GAAAAACTCA ACATTCCTGT GGTTAACACC
TTAATGGGTT TAGGTGCCTT CCCCGGCACT CACAAGCACA ATGTAGGCAT GCTGGGTATG
CATGGTCGAT ATGAAGCCAA TATGGCGATG CACAATTGTG ATTTAATTTT TGGTATTGGG
GTGCGCTTCG ATGATAGAAC CACCAACAAT GTGGAGAAAT ATTGTCCTAA CGCCACTATT
TTGCACATAG ATATCGATCC CTCTTCCATT TCCAAAACCA TCAGGGTGGA TATCCCCATC
GTGGGTTCGG CCGAGCAAAT TTTAGACAGC ATGCTGGCAT TACTGGAACA CACACAAGAT
AGTCAAGATA AGCAGGCCAT CGGTGAATGG TGGGAGCAAA TTACCCATTG GCGCGCCAAA
GACAGTCTCG CCTATGATAA AAATAGCGGT CGGATTAAGC CTCAGCAAGT GATTGAAACC
TTGTATAAAT TAACCAAGGG TGAAGCCTAT GTCACCTCAG ATGTGGGCCA GCATCAGATG
TTTGCCGCCC TGTATTACCC TTTCGATAAA CCCAGACGTT GGATAAATTC TGGCGGTTTA
GGCACCATGG GGTTCGGCCT TCCCGCCGCC ATGGGGGTCA AGATGGCCAT GCCCGATGAA
ACCGTGATTT GCGTGACTGG CGATGGTTCA ATTCAAATGA ATATCCAAGA GCTGTCCACT
GCCCTGCAGT ACGATACTCC AGTTAAAATC ATCAATTTAA ATAACCGTTT TTTAGGCATG
GTCAAGCAAT GGCAAGACAT GATCTATTCT GGGCGCCATT CCCATTCTTA CATGGATTCT
GTGCCTAATT TTGCCAAAAT TGCTGAGGCT TATGGCCATG TCGGCATGAC GATTAGCGAT
CCCAACAAGC TTGAAGCTGA ACTTGCCAAA GCCTTAGCCA TGAAAGACAA ATTAGTCTTT
GTCGACATCA GTGTGGATGA AACTGAGCAC GTCTACCCCA TGCTGATTAA AGGCGGGGCA
ATGAATGAAA TGTGGTTAAG TAAAACGGAG AAAAGCTAA
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| Protein sequence | MEMLSGASMI VRSLIDEGVE HIFGYPGGSV LDIYDALHEI SGVEHILVRH EQAAVHMADG
YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG
ISRPVVKHSF LVTDPAKIPE TIKKAFYIAS TGRPGPVVVD LPKDCLNPQV LHEYAYPESV
SMRSYNPTTM GHKGQIKRGL QALIQAKKPV LYVGGGAVIS GCDKQILSLS EKLNIPVVNT
LMGLGAFPGT HKHNVGMLGM HGRYEANMAM HNCDLIFGIG VRFDDRTTNN VEKYCPNATI
LHIDIDPSSI SKTIRVDIPI VGSAEQILDS MLALLEHTQD SQDKQAIGEW WEQITHWRAK
DSLAYDKNSG RIKPQQVIET LYKLTKGEAY VTSDVGQHQM FAALYYPFDK PRRWINSGGL
GTMGFGLPAA MGVKMAMPDE TVICVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM
VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMTISD PNKLEAELAK ALAMKDKLVF
VDISVDETEH VYPMLIKGGA MNEMWLSKTE KS
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