| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2115 |
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| Symbol | |
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| ID | 4018607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2511321 |
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| End bp | 2513597 |
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| Gene Length | 2277 bp |
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| Protein Length | 758 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637956139 |
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| Product | acyl-CoA dehydrogenase |
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| Protein accession | YP_563120 |
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| Protein GI | 91793469 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1960] Acyl-CoA dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000818712 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTATTA TCATACTGCT TTTATTAGCA ATAATAGTGC TTTTTGGGGT GCGTAATATC
AGGATGCAGT TTATCACTCG TCCTGTGTTT GCATTTTTCA AGAAAGTACT GCCTCCTCTG
TCTACCACTG AAAAAGAAGC CATGGAAGCG GGCGATGTGT GGTGGGAAGG TGAATTGTTC
CGCGGTAAGC CAAACTGGAA TACCTTACAC AGCTATGGCA AACCAGCCTT AACGGCTGAC
GAGCAAGCCT TTATCGATAA TCAGGTGATG ACAGCCCTGA CCATGATTGA TGATTTCGAC
ATAGTTCATA ATCGTAAAGA TTTACCCCCT GAACTGTGGT CTTATTTCAA GAAAGAAGGC
TTTTTCGCGC TTATCATTCC AAAGAAATTC GGTGGCCGTG AATTCTCAGC CTACGCCAAC
TCAACCATAG TCAGCATTAT TGCTTCACGT AGCGTCAGCG CCGCAGTGAC TGTTATGGTA
CCTAACTCAT TAGGCCCTGG AGAACTACTC ACCCATTACG GTACTACAGC ACAAAAAGAG
CGCTGGTTGC CCGATTTAGC CAAGGGTAAA GAGTTACCTT GCTTTGCCTT GACTGGCCCA
GAAGCGGGCA GTGATGCCGG CGCCATTCCT GATATCGGGG TTGTGTGTCG ACAAGAATTT
GAAGGTGAAG AAGTTTTAGG TTTAAGCCTC ACCTGGAACA AGCGCTACAT TACCTTGGCC
CCTGTTGCCA CTGTACTGGG TCTTGCGTTC CAAATGCGTG ACCCAGATGG GCTATTGGGT
GACATTAAAA ATATCGGTAT CACTTGTGCG CTAATTCCAA CTGACCACCC GGGTGTTGAA
ATTGGCCGTC GTCATAACCC TATGATGATG GCGTTTATGA ACGGTACCAC GAGCGGTAAA
GATGTTTTCA TTCCACTGGA TTGGATCATA GGTGGCCCAC AATACGCTGG TAAAGGCTGG
CGTATGCTGG TTGAGTGTTT GTCAGCAGGT CGCGGTATTT CTCTGCCAGC TCTTGCTACC
GCATCGGGTC ACGTGACCAC TAAAACCACC ACAGCCTACA GCTATGTGCG TCAGCAATTT
GGTATGTCTA TCGGTTTGTT CGAAGGCGTG CAAGAAGCCC TCGCGCGCAT TATCGGTAAT
ACCTATCAGT TAGAAGCGGC GCGCCGCTTA ACCACCACAG GTATTGATCT TAAGGTTAAG
CCATCAGTGG TAACCGCTAT CGCTAAATAC CACATGACAG AACTTGGCCG TGATGTGTTA
GAAGATGCCA TGGACATTCA GTCAGGCAAG GGCATTCAAC TAGGTAGCAA AAACTACTTG
GGTCATGCCT TTATGGCAAA CCCTATCTCT ATTACGGTTG AAGGCGCTAA CATTCTAACC
CGCTCCTTGA TGATTTTCGG TCAAGGTGCC ACTCGTTGTC ATCCATACGT GCTTGCCGAG
ATGGAAGCTG CGGCGATGGA GAACGAAACC GATGCACTAG ACAGGTTTGA CTCATTATTA
ATGGGCCACA TTGGGTACGC TTGTCGCAAC GCCTTAACAG CTTTTGCGAC GGCAATAACG
GCGAGCCGCT TCATCAAGGC GCCAGTCAGC GGTGCCACCC AGCAGTATTA TTCAGACATG
ACACGTATGT CAGCGGCGCT AGCCATCATG ACAGACTTAT CTATGCTGAT AATGGGCGGT
GATTTAAAGC GTAAAGAAAT GATGTCTGCC CGTATGGGTG ATGTATTAAG CCAGTTGTAT
TTAGGTTCAG CGACCTTAAA GCATTTTGAA GACAATGGCC GTCAGCAAGA TGATTTGCCA
ATCGTGCATT ATGTGATGCA GCAAAGACTT CATTTCGCCG CTAAGGCACT AGAAGAAGCG
AGCCGCAACT TCCCTAATTT GATTGTACGT GGCTTATTAA AAGTGCTTAT TTTCCCGCTA
GGTAATCACT TCAACCTGCC AAGCGACAAT CTGACTACCC AAGTGGTTAA AGGTATGCTG
CGTCCAGGAC CTGCTCGTGA CAGATTGACC TTCCTGTGCC CAGATTTTGA AGGCGACAAA
GGCGGTATTG CAGAAGTTGA GCAAGCATTC CTTGCTAAAT ACGCCAGCAA AGAGATTTAC
AAAAAGCTTA AGCAAGCTCA GCGTAATGGC CACCTTAAGT CAAAACAGCC CATGCCTGTG
TTGTTTGAAA AAGCCCTTGA GAAAGGCATT ATCAACGACA GCGAATACGC TCAGTTGCAA
GATGCCGATG CTAAGCGATT AGCTGCTATC AATGTGGATG ATTTCGACAA GCTATAA
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| Protein sequence | MSIIILLLLA IIVLFGVRNI RMQFITRPVF AFFKKVLPPL STTEKEAMEA GDVWWEGELF
RGKPNWNTLH SYGKPALTAD EQAFIDNQVM TALTMIDDFD IVHNRKDLPP ELWSYFKKEG
FFALIIPKKF GGREFSAYAN STIVSIIASR SVSAAVTVMV PNSLGPGELL THYGTTAQKE
RWLPDLAKGK ELPCFALTGP EAGSDAGAIP DIGVVCRQEF EGEEVLGLSL TWNKRYITLA
PVATVLGLAF QMRDPDGLLG DIKNIGITCA LIPTDHPGVE IGRRHNPMMM AFMNGTTSGK
DVFIPLDWII GGPQYAGKGW RMLVECLSAG RGISLPALAT ASGHVTTKTT TAYSYVRQQF
GMSIGLFEGV QEALARIIGN TYQLEAARRL TTTGIDLKVK PSVVTAIAKY HMTELGRDVL
EDAMDIQSGK GIQLGSKNYL GHAFMANPIS ITVEGANILT RSLMIFGQGA TRCHPYVLAE
MEAAAMENET DALDRFDSLL MGHIGYACRN ALTAFATAIT ASRFIKAPVS GATQQYYSDM
TRMSAALAIM TDLSMLIMGG DLKRKEMMSA RMGDVLSQLY LGSATLKHFE DNGRQQDDLP
IVHYVMQQRL HFAAKALEEA SRNFPNLIVR GLLKVLIFPL GNHFNLPSDN LTTQVVKGML
RPGPARDRLT FLCPDFEGDK GGIAEVEQAF LAKYASKEIY KKLKQAQRNG HLKSKQPMPV
LFEKALEKGI INDSEYAQLQ DADAKRLAAI NVDDFDKL
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