| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2093 |
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| Symbol | upp |
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| ID | 4018585 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2487863 |
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| End bp | 2488489 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637956117 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_563098 |
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| Protein GI | 91793447 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0000398312 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGTCG TTGAAGTAAA GCACCCGTTG ATCCGTCATA AAGTAGGTTT AATGCGCGAG
GCTGATATCA GCACCAAACG CTTTCGTGAA TTGGCGACAG AAGTCGGCAG TTTATTAACC
TATGAAGCCA CTTCTGATTT CGAAACAGAG AAAGTGACCA TAGAGGGCTG GAATGGCCCA
GTTGAGATAG ATCAAATCAA GGGTAAGAAA GTCACGGTAG TGCCTATTCT ACGTGCAGGT
CTTGGCATGA TGGACGGCGT ACTTGAGCAT ATCCCCAGTG CAAGAATTTC TGTTGTGGGC
ATTTACCGCG ACGAAGAAAC TTTAGAGCCA GTGCCGTATT TTGAAAAAAT CGTCAGTAAT
GTTGAAGAGC GTATCGCGCT GGTGGTTGAC CCTATGTTGG CAACAGGTGG CTCTATGATC
GCCACTATCG ACTTACTGAA AAGTAAAGGC TGTACTTCAA TTAAGGCGTT AGTGTTAGTG
GCAGCGCCAG AAGGCATTGC CGCTCTTGAA AAAGCGCACC CAGATATCGA GCTATATACC
GCATCGATTG ATAAATGCCT CAATGAGCAA GGCTATATTT TGCCAGGCCT TGGTGATGCC
GGCGATAAAA TCTTCGGTAC TAAATAA
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| Protein sequence | MKVVEVKHPL IRHKVGLMRE ADISTKRFRE LATEVGSLLT YEATSDFETE KVTIEGWNGP
VEIDQIKGKK VTVVPILRAG LGMMDGVLEH IPSARISVVG IYRDEETLEP VPYFEKIVSN
VEERIALVVD PMLATGGSMI ATIDLLKSKG CTSIKALVLV AAPEGIAALE KAHPDIELYT
ASIDKCLNEQ GYILPGLGDA GDKIFGTK
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