Gene Sden_2091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2091 
Symbol 
ID4018583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2485482 
End bp2486087 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID637956115 
Productalkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen 
Protein accessionYP_563096 
Protein GI91793445 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000100227 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGTAT TAGTAGGCCG TCCAGCCCCT GATTTTACAG CTGCAGCAGT ACTTGGAAAC 
GGTGAAATTG TTGATAGCTT TAACCTATCA ACAGCAATCA AAGGTAAGCC AGCAGTAATA
TTTTTCTATC CTTTAGATTT CACTTTCGTG TGTCCATCAG AGTTGATCGC ATTCGATCAC
CGTATGGCTG AGTTCACTTC ACGCGGCGTG GAAGTGATTG GTGTGTCTAT TGACTCACAG
TTCACTCACA ACGCATGGCG TAACACTCCA GTAGACAAGG GTGGCATTGG CCAAGTTAAA
TACACTTTAG TTGCTGACGT TAAGCACGAA ATTTGTAAAG CGTACGATGT TGAACATCCA
GAAGCCGGTG TGGCTTTCCG TGGTTCTTTC CTTGTAGACA AAGAAGGTCA AGTACGTCAC
CAAGTGGTTA ACGATTTACC ACTAGGCCGT AACGTTGACG AAATGCTGCG TATGATCGAT
GCACTTCAGT TCCACGAAGA GCACGGTGAA GTCTGTCCAG CAGGCTGGTC AAAAGGCGAA
AAAGGCATGA CAGCCAGCAC TGAAGGTGTT GCTGCTTACC TAAGAGATAA CTCAGACAAG
CTATAA
 
Protein sequence
MSVLVGRPAP DFTAAAVLGN GEIVDSFNLS TAIKGKPAVI FFYPLDFTFV CPSELIAFDH 
RMAEFTSRGV EVIGVSIDSQ FTHNAWRNTP VDKGGIGQVK YTLVADVKHE ICKAYDVEHP
EAGVAFRGSF LVDKEGQVRH QVVNDLPLGR NVDEMLRMID ALQFHEEHGE VCPAGWSKGE
KGMTASTEGV AAYLRDNSDK L