| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2089 |
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| Symbol | |
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| ID | 4018581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2483087 |
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| End bp | 2484937 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956113 |
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| Product | type III restriction enzyme, res subunit |
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| Protein accession | YP_563094 |
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| Protein GI | 91793443 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.553683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGCAAT CCAGTACTCA ATCTGAGACT CAGCCCATGC CTCAAGCTGC AGCTGAAAAT
GCCGCTGATA CGGCTCCTAG TATGGCGGCG GCAACAAACC CTATCCAGCT GCGCAATTAC
CAGCAGGATG CGGTGGATGC GACCATTAAT CACTTTAAAC GCAGCAAGGA TTCTGCAGTA
TTAGTACTGC CCACAGGTGC GGGTAAGAGT ATTGTGATTG CTGAACTTGC CCGTATCGCC
AAAGGCAATG TCTTGGTGTT GACCCACGTT AAGGAATTAG TGGAGCAAAA TGCGCAGAAG
GTTGGCTTAC TCACAGAATC TGCAAGCATT TACTCTGCGG GCTTAAAGCA AAAAAAAGCC
CAAGGCAAAA CTGTGGTGGC CAGCATTCAA TCTGCCGCCA GAGCCGTTGA GCGGTTTAGC
CAAGGGTTTT CCTTGGTTAT CATCGATGAG TGTCACAGAG TCAGCACAGA AAAAACCAGC
CAGTATCAAC AATTATTAAG CCAGCTCATC AAGCAAAATC CAAAACTTAA ACTACTCGGT
CTCACCGCCA CACCCTACCG TCTGGGTAGC GGTTATGTGT ATCGCCATCA TTATCATGGC
AAGGTGGGCA ATACTGACAA CCCAGTGTTT GAGAACTGCA TCTTTGATTT ACCCATGCGT
CCGCTTATCA AACAAGGCTA CCTCACCGAG CCCAAAATTT TCGATGGCCT AAGCGCGCAA
TACGATTTTA ATGCATTAAG CCCAAGTGAC ACTGGCGAAT ACCCGCAAGC AGAAGTCGAT
GCCCTGCTCA AGCACCAAGG CCGTGCAACT AAGGCGATTA TCAAGCAAGT GAAGCAAGTT
GCCGAGCTGA GGCGCGGGGT ATTAATTTTT GCAGCAACTG TGCGTCACGC GCAGGAAATC
ATGACCTATT TGGATGACAG CGCTGCCCTT ATCACCGCCA CCACTCCCCA TCTTGAGCGA
GATGACATCA TCAGCCGCTT TAAAACCGAG TCCCTTCGGT ATATCGTCAA TGTGGCAGTA
CTCACCACAG GCTTTGATGC GCCCCACGTG GACTTAATTG CGATTTTACG CCCCACCGCC
TCCATCAGCT TGTTTCAGCA GATGATAGGT CGCGGCCTAC GGCTTGCTCC CAATAAAACC
GATTGTTTAG TGATAGATTA TGCCGCCAAT GGCTATGACT TATATTACCC TGAAGTGGGC
CAAGCCAAGC CCAATAGCCG CGCCGTGCCG GTGCAAGTGC ACTGCCCTGT GTGCAGTTTC
GCCAATACTT TTTGGGGCTT AGTGGATAAT GACGGCGATC TAGTGGAGCA TTACGGCCGC
CGTTGCCAAG GCTTGGTCGA TTCTGAGCTG CAAAGCAGCA CAGTGAACAT AAAAGAAGTG
CAATGTGATT TTCGCTTTCG TTCTAAAGCC TGCCCTGATT GCGGCAGCGA CAATGACATC
GCCGCACGAA TTTGCTTGCA ATGCGATAGC ACCCTTATTG ACCCCGACAA ACGCCTCAAA
CAAGTGCTCA ACGCTCAGCA CCACCATTTA TTTAAATGCC AAGAGATGTT GTTAACACAG
GATGGGAACA AGCTTGTGGT GCAATATCTT GACGTAGAGG GCAATGATTT TAAGCAGCAG
TTTTACTTTG ATACCCCGGG GCAGCGGCGA GCTTTTTTTG CGGTATTTGC AATGAGTCAT
ACTCGCACCC CAGGAATGGC CCACCCTAAG TATCACAAGG TTGAAGATGT GCTCAAGGAT
CTCAAGCGTT TTCGCAAACC TGACATGCTG TTACTGAAGA AAAATAAAAA GTTTTGGCAA
TTGCAGGAAG CTTTTTTCGA TTACCAGGGT CGTTATCAAT TAAGCTATTA G
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| Protein sequence | MTQSSTQSET QPMPQAAAEN AADTAPSMAA ATNPIQLRNY QQDAVDATIN HFKRSKDSAV
LVLPTGAGKS IVIAELARIA KGNVLVLTHV KELVEQNAQK VGLLTESASI YSAGLKQKKA
QGKTVVASIQ SAARAVERFS QGFSLVIIDE CHRVSTEKTS QYQQLLSQLI KQNPKLKLLG
LTATPYRLGS GYVYRHHYHG KVGNTDNPVF ENCIFDLPMR PLIKQGYLTE PKIFDGLSAQ
YDFNALSPSD TGEYPQAEVD ALLKHQGRAT KAIIKQVKQV AELRRGVLIF AATVRHAQEI
MTYLDDSAAL ITATTPHLER DDIISRFKTE SLRYIVNVAV LTTGFDAPHV DLIAILRPTA
SISLFQQMIG RGLRLAPNKT DCLVIDYAAN GYDLYYPEVG QAKPNSRAVP VQVHCPVCSF
ANTFWGLVDN DGDLVEHYGR RCQGLVDSEL QSSTVNIKEV QCDFRFRSKA CPDCGSDNDI
AARICLQCDS TLIDPDKRLK QVLNAQHHHL FKCQEMLLTQ DGNKLVVQYL DVEGNDFKQQ
FYFDTPGQRR AFFAVFAMSH TRTPGMAHPK YHKVEDVLKD LKRFRKPDML LLKKNKKFWQ
LQEAFFDYQG RYQLSY
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