| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2087 |
|---|
| Symbol | |
|---|
| ID | 4018579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2480068 |
|---|
| End bp | 2480958 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637956111 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563092 |
|---|
| Protein GI | 91793441 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGTA TTTACATTTC AATTATTCTA CTTTTTTTTG CCATAACTAT GAGCAGCAAT
AGTTACAGTA AAGATCGATT TCCTACTTTA GAAACTCGAT ATTTTGGCCA GAAACCACCC
GGTTTAACTG CTGAAGTTTT TGCTCCTGGG CTAATTTCAA CTGAAGAGGG CTATGAAAGT
GGCGTTTCAT TTTCAGCAGA TATGAGAGAG CTTTATTTCG TTAAAAGAGG AGGAGAGTTT
AAGGAACGCA CACCCGTTGT GATTCGATAT GAAAATCAGC GCTGGGGGAA GGCATCTGTT
ACCGATATAG AGCACCCGTA TTTCTCTAAG GACGGTAATA CCTTATACCG AAGAAATTCA
TATAGGGAAC GAACTGACAG TGGTTGGTCA GAGAAGAAAA GCCTGGGACC GTTCTTTAAA
GACCATCCTA TTATGGGGAT TTCGGTTTCA TCAAATGGCA CTTATTATTT TGATCTTATG
GACAGGGAAG GCGACGGCCA TATCAGTTAT TCACGCCTGA TAGAAGGCAA GTATGAAAAG
CCACAAAAAA TGAAAAAGGA AATTAATTCC GGTAAGTGGA TAGCACACCC CTTTATTGCC
CCTGATGAGT CCTATTTGAT GTGGGATGCT GAGAGAAAAA GTGGATATGG CGATGCGGAT
TTGTATATTA TTTTTCGCCA GACCGATGGT TCATGGGGAG CCGCCATTAA CATGGGAGAT
AAGATAAATA CTGCATCTCA GGAAGGGGGC GTTCGCTTAA CACCTGATGG AAAATATTTA
ACATTTTGGC GCGGAAATCA AAAGATTAGA GAAGATGGAA CTAGATATTG GGTAGGAAGC
CCTTATTGGG TGGACGCTCA GGTTATTGAA AACCTCAGAA GCAAACAATA A
|
|---|
| Protein sequence | MNRIYISIIL LFFAITMSSN SYSKDRFPTL ETRYFGQKPP GLTAEVFAPG LISTEEGYES
GVSFSADMRE LYFVKRGGEF KERTPVVIRY ENQRWGKASV TDIEHPYFSK DGNTLYRRNS
YRERTDSGWS EKKSLGPFFK DHPIMGISVS SNGTYYFDLM DREGDGHISY SRLIEGKYEK
PQKMKKEINS GKWIAHPFIA PDESYLMWDA ERKSGYGDAD LYIIFRQTDG SWGAAINMGD
KINTASQEGG VRLTPDGKYL TFWRGNQKIR EDGTRYWVGS PYWVDAQVIE NLRSKQ
|
|---|
| |