| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2080 |
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| Symbol | |
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| ID | 4018572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2468490 |
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| End bp | 2469350 |
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| Gene Length | 861 bp |
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| Protein Length | 286 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637956104 |
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| Product | DNA-binding transcriptional regulator HexR |
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| Protein accession | YP_563085 |
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| Protein GI | 91793434 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.00496237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTATGA ATACCCTTGA AAAGGTTCAA AACAGCCTTA ACCAATTTAG TAAGTCAGAA
CGAAAAGTCG CAGAAGTGAT CCTTTCGTCA CCGCAAACCG CTATCCATTC AAGCATAGCA
ACTTTAGCCA AAATGGCTGA TGTGAGTGAG CCGACGGTGA ACCGTTTCTG TCGCCGTCTA
GACACTAAAG GTTTCCCTGA TTTTAAACTC CATTTGGCTC AAAGCCTAGC CAATGGCACA
CCTTATGTGA GCCGTCACGT AGAGGAAGAC GACAGCACTG ATTCCTACAC CACTAAGATT
TTCGAATCTT CTATGGCGTC ACTGGATACG GCCCGTCAAA GCTTAGACAC GGCGGCTATC
CACAAGGCAG TAGACATACT GACTCAAGCG AAAACCATCT CCTTCTTCGG CTTGGGTGCC
TCGGCCTCTG TCGCCCACGA CGCGCAGAAT AAATTTTTCC GTTTTAACGT GCCTGTGATT
TGTTTCGATG ACGTGCTAAT GCAGCGCATG AGCTGCATTA ATTGCAATGA AGGCGATGTG
GTTGTGCTGA TTTCTCATAC GGGACGGACT AAATCCTTAA TTGAAATCGC CCGCATAGCA
AGGGAAAATG GCGCGGCTGT GATTGCCATA ACTGCCAGAA ACTCCCCGCT GTCGCTGGAA
TGTACCTTAC CTGTGACCAT GGAAGTACCT GAAGATACCG ACATGTACTT GCCGATGGCA
TCCCGCTTGG CGCAGTTGGT CACCATAGAT GTGCTCGCCA CCGGATTTAC CTTAAGACGC
GGCCCAAGAT TTAGAGAAAA CTTGAAGCGC GTGAAGGAAG TATTAAAAGA ATCACGGGTG
AATAAAGATT CTATTCTCTA G
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| Protein sequence | MLMNTLEKVQ NSLNQFSKSE RKVAEVILSS PQTAIHSSIA TLAKMADVSE PTVNRFCRRL
DTKGFPDFKL HLAQSLANGT PYVSRHVEED DSTDSYTTKI FESSMASLDT ARQSLDTAAI
HKAVDILTQA KTISFFGLGA SASVAHDAQN KFFRFNVPVI CFDDVLMQRM SCINCNEGDV
VVLISHTGRT KSLIEIARIA RENGAAVIAI TARNSPLSLE CTLPVTMEVP EDTDMYLPMA
SRLAQLVTID VLATGFTLRR GPRFRENLKR VKEVLKESRV NKDSIL
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