| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2076 |
|---|
| Symbol | |
|---|
| ID | 4018568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2463485 |
|---|
| End bp | 2464135 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637956100 |
|---|
| Product | keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase |
|---|
| Protein accession | YP_563081 |
|---|
| Protein GI | 91793430 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTAGAGA ATAACTGGTC TTTGCAACCA AAAGATGTAT TTAAATGCAG TCCTATTGTT
CCTGTGATGG TCATCAATAA GATAGAGCAC GCTGTCCCCT TGGCCAGAGC TTTAGTGGCA
GGCGGTATTA AGGTATTGGA AGTGACACTG CGCACGCCTT GCGCCTTAGA AGCCATAGCG
CTTATCGCCA AAGAAGTGCC CGAAGCCTTA GTGGGCGCAG GCACAGTATT AAACGAAACT
CAGCTTCAAC AAGCCATTGA TGCGGGCTCT CAGTTTATTA TCACGCCAGG CGCCACTCCT
GATCTATTAA AGGCGGCCAT GAAAGGCACA GTGCCGCTTA TTCCAGGGGT TGCCAGCATT
TCTGAAGTGA TGGCAGGCAT GGAGCTGGGT TACACCCACT TTAAATTCTT CCCAGCCGAA
GCGTCAGGCG GTGTGGATGC CCTAAAAGCC TTTTCTGGCC CATTAGCTAA TATCCGTTTT
TGCCCAACCG GGGGGATTAC GCCAGACTCA TATCTGCGTT ACTTGGCATT GCCCAATGTG
GATTGTATTG GCGGCAGCTG GATTGCGCCA ACAGATGCGG TAGAGGCTGA AGATTGGCAG
CGGATCACAG ACCTGTGTCA GGCGGCATTG AGCCCATTAA GCAAAGCCTA G
|
|---|
| Protein sequence | MLENNWSLQP KDVFKCSPIV PVMVINKIEH AVPLARALVA GGIKVLEVTL RTPCALEAIA
LIAKEVPEAL VGAGTVLNET QLQQAIDAGS QFIITPGATP DLLKAAMKGT VPLIPGVASI
SEVMAGMELG YTHFKFFPAE ASGGVDALKA FSGPLANIRF CPTGGITPDS YLRYLALPNV
DCIGGSWIAP TDAVEAEDWQ RITDLCQAAL SPLSKA
|
|---|
| |