Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2068 |
Symbol | |
ID | 4018560 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2454345 |
End bp | 2455373 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637956092 |
Product | integrase catalytic subunit |
Protein accession | YP_563073 |
Protein GI | 91793422 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 45 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAA TACAAGAAGC TTATGCCAAT GGTGCGCGCC TTTACAAGGC TTGTATTGAA GCTGAGCTCA GTAAGCGTAC CTATCGACGT TGGTATCGAG CGGGTGTGGT GCAGGCTGAT TTAAGGCCAA CAGCGTTTCG GCCAGAGCCC GCCAACAAGC TAAAAGAGCA TGAACGAGAG CAGATATTAG CGGTATGCAA TGAGCCTGAA TATGCCAGCT TACCTCCCTC ACAAATAGTG CCAACACTAT TGGATAAGGG GATTTATATT GCATCAGAGG CCAGTTTCTA CAGGGTATTA GATGCCAATG ACCAGCTTAA CCATAGAGGT CGCAGCCAAG TTGCAGTTAA CCGCAGTAAG CCACTTAGTT ACACGGCCGA TGGCCCAAAC CAAGTGTGGT CCTGGGACAT CACGTATCTG GCCTCAGTAG TTAAAGGTCA GTTTTACTAC CTGTACATGT TTGAGGATAT TTACAGCCGA AAAATCGTCG GTTATGAAGT CCATGAACAA GAATGTGGCG AGCGTGCCGC TGAGCTAATC CAACGCAGCA TGCTACGGGA ACAATGCTTT AAAAAGCCAC TGGTGTTGCA CTCTGACAAT GGTGCGCCAA TGAAGTCTCT GACGATGAAG GCCAAGCTTG AAGAGCTGAG TGTTACCGCT TCACTGAGCC GGCCTAGAGT GAGTAACGAC AACCCCTATT CAGAGTCATT ATTTAAGACC TTAAAATACC GTCCGCAATG GCCAAAATCA GGTTTTAGCA GTTTAGCCGC AGCAAGGGAA TGGGTTGAGA AGTTTGTGAA GTGGTACAAC GATGAGCATA AACATAGCAA GCTTAACTTT GTCTCACCAG GGCAACGTCA TGCGTTGCAA GATAGCGCTA TCTTAGACAA GCGAAAGAAA GTTCTCGAAG CGGCTAAGGC AAGAAACCCC AAGCGTTGGT CCAAGGACGT TAGAAATTGT GAGGCGGTTG GCCCAGTAAT GCTAAACCCA GATAAGGCAC CCGCAGACGA TGTAATAAAT GCAGCTTAA
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Protein sequence | MILIQEAYAN GARLYKACIE AELSKRTYRR WYRAGVVQAD LRPTAFRPEP ANKLKEHERE QILAVCNEPE YASLPPSQIV PTLLDKGIYI ASEASFYRVL DANDQLNHRG RSQVAVNRSK PLSYTADGPN QVWSWDITYL ASVVKGQFYY LYMFEDIYSR KIVGYEVHEQ ECGERAAELI QRSMLREQCF KKPLVLHSDN GAPMKSLTMK AKLEELSVTA SLSRPRVSND NPYSESLFKT LKYRPQWPKS GFSSLAAARE WVEKFVKWYN DEHKHSKLNF VSPGQRHALQ DSAILDKRKK VLEAAKARNP KRWSKDVRNC EAVGPVMLNP DKAPADDVIN AA
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