Gene Sden_2068 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2068 
Symbol 
ID4018560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2454345 
End bp2455373 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content47% 
IMG OID637956092 
Productintegrase catalytic subunit 
Protein accessionYP_563073 
Protein GI91793422 
COG category[L] Replication, recombination and repair 
COG ID[COG2801] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAA TACAAGAAGC TTATGCCAAT GGTGCGCGCC TTTACAAGGC TTGTATTGAA 
GCTGAGCTCA GTAAGCGTAC CTATCGACGT TGGTATCGAG CGGGTGTGGT GCAGGCTGAT
TTAAGGCCAA CAGCGTTTCG GCCAGAGCCC GCCAACAAGC TAAAAGAGCA TGAACGAGAG
CAGATATTAG CGGTATGCAA TGAGCCTGAA TATGCCAGCT TACCTCCCTC ACAAATAGTG
CCAACACTAT TGGATAAGGG GATTTATATT GCATCAGAGG CCAGTTTCTA CAGGGTATTA
GATGCCAATG ACCAGCTTAA CCATAGAGGT CGCAGCCAAG TTGCAGTTAA CCGCAGTAAG
CCACTTAGTT ACACGGCCGA TGGCCCAAAC CAAGTGTGGT CCTGGGACAT CACGTATCTG
GCCTCAGTAG TTAAAGGTCA GTTTTACTAC CTGTACATGT TTGAGGATAT TTACAGCCGA
AAAATCGTCG GTTATGAAGT CCATGAACAA GAATGTGGCG AGCGTGCCGC TGAGCTAATC
CAACGCAGCA TGCTACGGGA ACAATGCTTT AAAAAGCCAC TGGTGTTGCA CTCTGACAAT
GGTGCGCCAA TGAAGTCTCT GACGATGAAG GCCAAGCTTG AAGAGCTGAG TGTTACCGCT
TCACTGAGCC GGCCTAGAGT GAGTAACGAC AACCCCTATT CAGAGTCATT ATTTAAGACC
TTAAAATACC GTCCGCAATG GCCAAAATCA GGTTTTAGCA GTTTAGCCGC AGCAAGGGAA
TGGGTTGAGA AGTTTGTGAA GTGGTACAAC GATGAGCATA AACATAGCAA GCTTAACTTT
GTCTCACCAG GGCAACGTCA TGCGTTGCAA GATAGCGCTA TCTTAGACAA GCGAAAGAAA
GTTCTCGAAG CGGCTAAGGC AAGAAACCCC AAGCGTTGGT CCAAGGACGT TAGAAATTGT
GAGGCGGTTG GCCCAGTAAT GCTAAACCCA GATAAGGCAC CCGCAGACGA TGTAATAAAT
GCAGCTTAA
 
Protein sequence
MILIQEAYAN GARLYKACIE AELSKRTYRR WYRAGVVQAD LRPTAFRPEP ANKLKEHERE 
QILAVCNEPE YASLPPSQIV PTLLDKGIYI ASEASFYRVL DANDQLNHRG RSQVAVNRSK
PLSYTADGPN QVWSWDITYL ASVVKGQFYY LYMFEDIYSR KIVGYEVHEQ ECGERAAELI
QRSMLREQCF KKPLVLHSDN GAPMKSLTMK AKLEELSVTA SLSRPRVSND NPYSESLFKT
LKYRPQWPKS GFSSLAAARE WVEKFVKWYN DEHKHSKLNF VSPGQRHALQ DSAILDKRKK
VLEAAKARNP KRWSKDVRNC EAVGPVMLNP DKAPADDVIN AA