| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2053 |
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| Symbol | |
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| ID | 4018545 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2437171 |
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| End bp | 2438055 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637956077 |
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| Product | aminotransferase, class IV |
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| Protein accession | YP_563058 |
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| Protein GI | 91793407 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | [TIGR03461] aminodeoxychorismate lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTTGCCTC TGTGGACCAA TCAGCCAACT ACTAATGGCA CTGTTCATAG CACTGCTCAG
GGTACAGCTC AGGGCACTGT TCATGGCACG ATTCAGGGTA TACACCCCTT AGACCGCGCC
ATTGCTTACG GTGATGGCGT GTTTGCCACC ATGCGCAGTA ATGGCGAAAT TCTGTTTCTG
GCCGATCATC TCGCCCGTCT GCAACAATCC TGCGCCCGTC TAGGGTTTCA CTGGCAAGCA
TCGAATACAT TGATGTCAGA GTTAACTCAG CTGGCAGCGA CCTATCCTAA GCACTGTATC
AAGCTGATTG TCAGTCGCGG TGTGGGAGGG CGAGGCTACC AGGCCCCCAT TTCCGTTTCA
GCCACTGAGA TAGTGTCCGT CAGTGAAATA CCGTCTTTTT ATGGGCAATG GCAACAAACT
GGGATAAGGC TTGCTTTAAG TGATATTCGC CTAGGTCAGC AGCCAAGGCT TGCGGGGATT
AAGCATTTGA ATCGTTTAGA ACAAGTGCTG ATCAAGAGCC AAGTCTTGCC TCAGGGCATG
GATGACTGGC TGGTGCTGGA CAGCCAAGAC AATGTTATCG AGTCTTCGGT GGCGAATCTA
TTTGGCGTCA AAGATGGAAT TATTTATACT CCAGCGTTAC ATCAAGCTGG GGTATCCGGT
GTCACACGAG AAATTATCAT CAAGGCGCTG CTGACCTTAG CACTTCCGCA AGGGCACACA
GTCGTGGTGA GTGAGTTTAA ACAAGATTTT CTGATGAGTT GTGAGCATGT GTTTCTCAGT
AATAGTTTGT TCGGCGTAGT CGATGTCACC GGGATTGATA ACCAAGGCTT TGCTCCTTGG
CCCCAATCGG CTCAATTAAG GCATTCATTA GGGTTATCCC TCTAG
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| Protein sequence | MLPLWTNQPT TNGTVHSTAQ GTAQGTVHGT IQGIHPLDRA IAYGDGVFAT MRSNGEILFL
ADHLARLQQS CARLGFHWQA SNTLMSELTQ LAATYPKHCI KLIVSRGVGG RGYQAPISVS
ATEIVSVSEI PSFYGQWQQT GIRLALSDIR LGQQPRLAGI KHLNRLEQVL IKSQVLPQGM
DDWLVLDSQD NVIESSVANL FGVKDGIIYT PALHQAGVSG VTREIIIKAL LTLALPQGHT
VVVSEFKQDF LMSCEHVFLS NSLFGVVDVT GIDNQGFAPW PQSAQLRHSL GLSL
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