Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2042 |
Symbol | |
ID | 4018534 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2422664 |
End bp | 2424400 |
Gene Length | 1737 bp |
Protein Length | 578 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637956066 |
Product | sulphate transporter |
Protein accession | YP_563047 |
Protein GI | 91793396 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.875705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGGGGT TACAATCCCT ATCAAAATAT GAGCGCCATT GGCTAAAAGA TGATGTGCGT GCAGCCCTTT CTGTGGCAGC TGTCGCCTTG CCGGTTGCCA TTGCCTATGC ACAACTGACG GGCGTCAATG CCGCCGTGGG CTTGTATTCT TGTGTCTTGC CTATGTTGGT GTATGCACTC ATGGGCACCT CAAGACAATT AATTGTTGGG CCAGATGCGG CAACTTGTGC TGTGATAGCC GCCGTGGTCA CGCCACTTGC CGCAGGGGAT GCCTTAAAAC ACTGGCAGTT AGTGATGACC ATGACAGTGA TGACAGGCTT TTGGTGTCTT ATCGCCAGCC GTTTCAAATT AGGTGTGCTC GCCGACTTCC TGTCAAAACC CATTTTAATG GGGCTACTCA ACGGGGTGGC GATCACTATT ATTGTGGGTC AGTTTTCAAA AATTTTTGGT TTTGATTTTG AAGAAAAATA CCTGTTAGAG CGTCTCGGTG GCGTGCCGAC GTATTTATCC AAGACCCACG GTCCGACCCT ATTAATGGCA CTACTTACAG TGGCTGTGTA CTTTGCCATG AAACGTTTTC GTCCTGCTTG GCCTTCATCA ATGTTTGCCA TTGCCGCCGG CGGACTGTTG GTGTGGGTGT TCAATTTGGG CCAATTCGAC ATTAAAACCA TTGGCAGTGT GGCCGGTGGT TTACCCACGT TTCAAACACC CACCTTTAAT CTAGGTATTG CCCGTGAGCT TGTCATGCCA GCGCTTAACT TGGCCATGGT GAGCTTTGTG AGCATGATGT TGACGGCTCG AAGCTTTGCG GCGAAAAATG GCTATGACAT AGACGCGGAT AAAGAATTTA GGGCATTGGG CTTTGCCAAT ATTGCCTCGG CCTTATCCCA AGGTTTTGCG GTGAGTGGCG CCGATTCTCG CACAGCGGTA AACGATGCCA ATGGCGGTAA GACACAACTC GTGTCTATTA TTGCCGCCTG TATCATCGCC ATAGTGGCGA TATTTCTAAC GGCGCCACTT GAGTTTATCC CCAGTGCCGC CTTAGGTGTG GTATTGGTTA TCGCCTCAAT CCACCTTATT GATTTAAAAG CTATCTGGAA GCTGAGGCTG AGGGACAGGC CGGCCTTTTT CTTGGCCTTG ACCACCTTAT TTGCCGTGCT CTTTATCGGG GTTATCCCGG GTATTACCCT GGCGGTGTTA TTGGGATTGT TCCAATTTTT GCAAACCGTC ATGCGCCCGA CAGATCAAGT GCTGGGCTTA GACAGCAAAG GGGTTATTCG CAGTGTGGAT AATGATGAAA AAGCCAAAGC CATCCCAGGG GTGTTTATTT ATCGGTTTAA TTCACCTTTG ACCTATTTTA ATGCCACCTA TTTTAAGCGC CGTTTGCTGG AGCGTTATGT GAAAGAGTCG GAGCACGCCG ATTGCATTAT CATAGACACA GTGCCGTGTT TCACTCATTT AGATTTAAGC GTAATGGCTA TGCTGGCTGA TTTAGAAGTC TTGTTTAAAA AACGCGGTGT TAGGCTGATT TTGGCCGGCC GTAAGCGGCA AATGATAGGT TGGTTCCAGC AAACTGACAT GAAATTCGGT GATGGCGGCA TAGTGATCCG CTCAGATCTG TATCTGGCCA TCAAGCTTAA TCAGCATTAC AAGGCCGCGC TTGCCGAGGG CAGTGCGGCT GTGGTGCAGA AACAAGAAGA CGATAAAGAC AAGGTGCTAA CGCACAGTCA GCTGTAA
|
Protein sequence | MPGLQSLSKY ERHWLKDDVR AALSVAAVAL PVAIAYAQLT GVNAAVGLYS CVLPMLVYAL MGTSRQLIVG PDAATCAVIA AVVTPLAAGD ALKHWQLVMT MTVMTGFWCL IASRFKLGVL ADFLSKPILM GLLNGVAITI IVGQFSKIFG FDFEEKYLLE RLGGVPTYLS KTHGPTLLMA LLTVAVYFAM KRFRPAWPSS MFAIAAGGLL VWVFNLGQFD IKTIGSVAGG LPTFQTPTFN LGIARELVMP ALNLAMVSFV SMMLTARSFA AKNGYDIDAD KEFRALGFAN IASALSQGFA VSGADSRTAV NDANGGKTQL VSIIAACIIA IVAIFLTAPL EFIPSAALGV VLVIASIHLI DLKAIWKLRL RDRPAFFLAL TTLFAVLFIG VIPGITLAVL LGLFQFLQTV MRPTDQVLGL DSKGVIRSVD NDEKAKAIPG VFIYRFNSPL TYFNATYFKR RLLERYVKES EHADCIIIDT VPCFTHLDLS VMAMLADLEV LFKKRGVRLI LAGRKRQMIG WFQQTDMKFG DGGIVIRSDL YLAIKLNQHY KAALAEGSAA VVQKQEDDKD KVLTHSQL
|
| |