| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2024 |
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| Symbol | |
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| ID | 4018516 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2399733 |
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| End bp | 2401577 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637956049 |
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| Product | AsmA |
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| Protein accession | YP_563030 |
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| Protein GI | 91793379 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2982] Uncharacterized protein involved in outer membrane biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.000524921 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATTGA TTAAATGGCT GTTAGCCATT GCTCTGACTC TGTGTGTTTC ATTAGTGCTT
TATATCACCC TATTATTTGA TGTAAATGCC TTTAAACCTG AATTGATAGA GCTGGTAAAG
AAACAAACCG GCCGTGAATT ACAAATAAAG CAAGATTTGA GCTGGAGTTT TTTCCCCAAG
CTTGGCATCG ACTTAGGTGG GATCATCTTG TCGAACCCAC AAGGCTTCAA AACGGATGAG
ATGATCAAGG TGAAGGGGGT CGTTGCCAGC GTGGCACTCA AACCATTATT CTCAAACAAG
GTGCAAATCG AGCAACTGCT GTTAGATGGC GTCGAGATTA ACTTAGTCAC CACCCAAGAT
GGCCGCTCGA GTCTAGATGG CCTAGTGGCA GAGAATGCGC CTAACCGTGC CCCAGAGGTG
ACACAAGAAA GTCTGTCAAA AGGTAGCGGC CAATTTACTA TGGATGAACT CAGTATTGGC
GGCGTCCGTG TGACAAATGC TAAGGTGAAT ATCATCAATC TTGCACAGGA CAGCCTAACC
ACATTAAATT TAAAAGAGTT CACCTTAGGT AAATTCAGTT TAGGTCAAGC ATCACAGCTT
CAATACGAAT TTGAAATGGC GGCCAATATC AATGTTAGCA GTCAAGGTAA AGGATTACTG
ACTGTGAGTT CAGATCTTAG CAAGCTGAGC ATAGATGGAT TAGACATTAA GACCACAATG
AGTGGCGATG CCTTACCTGA GACCATTAAT ACGGCAATGA TAGGGGCGCT TAGCCTCGAT
ATTAATCGAC AGGCCCTGCA ATTAACCTTG GATAAACTGT CGGCACAAGA TTTCAGCGGC
AGCGCCGATA TTGGCGTTAA CTATGCCAAC CCTATCCCTA AGATTAATCT GTCACTCGTT
CTTGATGAAA TGGATCTTGA CCCCTATTTG CCTGCTGAAG AAGGGGATCC CGCCACTGAC
ATCCATGAGT CATCAACGAC TGTCGCTGCC TTAGAGCCTG ACTTAAGCGC ATTAAAGACG
CTGGATGTTA ACCTTAAGGT AAAAATTGCC GCGATAAAAG CTGCCAAGCT TAAAACTGAA
AACTGGCAAA TAGCCATGAA GGTGAAGAAT GGCAAGCTGA CCATTAAGGA ATTTAGCCTA
GATCTGTATC AAGGCAAGAT GAACTTAACT GCATCTCTGG ATGCTAATCA AACGATTGCC
CGTTATCAGT TCGAGCAATC ACTTAAGGAC GTGCAAATAA GGCCTTTGCT CATGGATGCC
GCAGAGCTTG AAGTGTTATC AGGCACGGCG AATTTTTCAA TGGCTGGTAC GGGGCAAAGC
CTGATCCCGA CTAAGTTGAA ACAAAACCTT GTGGCAGACG GGGCGTTTGA GGTGGCTGAC
GGCGCGCTTT ATGGCGTCAA TATCCCGCAA ATGCTGCGTA CTGCTCAGGC AAAGCTCAGT
GGTGAATTAT CGGCGGTAGA CACTCAGGAG CTTAAAACTG ACTTTAGTCG CTTAACGGGT
AGCTTTAACA TTAAAGAGGC GAGTGTAACC AATCCCGATC TGGCGATTTC TGCGCCACTG
CTGCGCATCG CTGGCGCCGG TAGCCTAGAT ATAATCAGCC AAGCCATAGA TTATAAACTC
ACGACCCGTG TTGTCGGCTC TTTGGCAGGA CAAGAAGAGC AAGCAAATCC ATTAAAAGGC
TTAGATATTC CACTTAAAAT ATATGGCACA GTACAGGAGC CTGAATATGG TTTGGATACC
AGTGGTTTAT TGGATGCGAA ACTTAAGCAA GAAACTGAAA AAGTGAAAGA GAAAGTTAAA
GACAAGCTGA AAGATGGCTT ATTAAAACGT TTAGGAGATC TTTAA
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| Protein sequence | MKLIKWLLAI ALTLCVSLVL YITLLFDVNA FKPELIELVK KQTGRELQIK QDLSWSFFPK
LGIDLGGIIL SNPQGFKTDE MIKVKGVVAS VALKPLFSNK VQIEQLLLDG VEINLVTTQD
GRSSLDGLVA ENAPNRAPEV TQESLSKGSG QFTMDELSIG GVRVTNAKVN IINLAQDSLT
TLNLKEFTLG KFSLGQASQL QYEFEMAANI NVSSQGKGLL TVSSDLSKLS IDGLDIKTTM
SGDALPETIN TAMIGALSLD INRQALQLTL DKLSAQDFSG SADIGVNYAN PIPKINLSLV
LDEMDLDPYL PAEEGDPATD IHESSTTVAA LEPDLSALKT LDVNLKVKIA AIKAAKLKTE
NWQIAMKVKN GKLTIKEFSL DLYQGKMNLT ASLDANQTIA RYQFEQSLKD VQIRPLLMDA
AELEVLSGTA NFSMAGTGQS LIPTKLKQNL VADGAFEVAD GALYGVNIPQ MLRTAQAKLS
GELSAVDTQE LKTDFSRLTG SFNIKEASVT NPDLAISAPL LRIAGAGSLD IISQAIDYKL
TTRVVGSLAG QEEQANPLKG LDIPLKIYGT VQEPEYGLDT SGLLDAKLKQ ETEKVKEKVK
DKLKDGLLKR LGDL
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