| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2012 |
|---|
| Symbol | |
|---|
| ID | 4018501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2388225 |
|---|
| End bp | 2388719 |
|---|
| Gene Length | 495 bp |
|---|
| Protein Length | 164 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637956034 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_563018 |
|---|
| Protein GI | 91793367 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.526613 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAATTG AGTTTCCCTT AGTCAATGAG TCACAATGTG GCAATCGCTT GAATCAAGCG
ATTGAGCACC ACAGACGGGG AGAATTTGGC TTGATTTTGG CTATGCTATC GGCAGACGCC
AGAGATCAGG CGCAATTTCA AATAGACAGT GATTTATCCC AAGCAGAAAA GTTAACCAAA
CAATTTGAAA TTCCAAAGCC TCAAGCGCTA ATTGCCGATC TTTCGACCAC TGAGCCGCTA
ACCGATAATG CACAGGTTTA TTATCAACAA GGGCTGCGAG GATTTCAGTT AGCTCAAGCG
CTCACTCCAG AAGCCTTAGT CATTCGCGGC CATACCTCAG ATGATATGGC GCTTGCACTG
AGTAATTGCG ACCCCTTAAC TCGCTTGCGA CAAGATAATG CCATCCCTAA GTTGCCCGAC
TTTAATCAGA TGCACTTCAT CGACCAACTG GCAATACAGC GTCAAATCAG TGCGACGTTG
GCATTAAGTG CTTAA
|
|---|
| Protein sequence | MQIEFPLVNE SQCGNRLNQA IEHHRRGEFG LILAMLSADA RDQAQFQIDS DLSQAEKLTK
QFEIPKPQAL IADLSTTEPL TDNAQVYYQQ GLRGFQLAQA LTPEALVIRG HTSDDMALAL
SNCDPLTRLR QDNAIPKLPD FNQMHFIDQL AIQRQISATL ALSA
|
|---|
| |