| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_2011 |
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| Symbol | |
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| ID | 4018500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2387074 |
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| End bp | 2388141 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637956033 |
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| Product | phospho-2-dehydro-3-deoxyheptonate aldolase |
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| Protein accession | YP_563017 |
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| Protein GI | 91793366 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
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| TIGRFAM ID | [TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.216092 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAATTA AAACAGACGA ACTTCGTACA TCCTTATTAT GTAAAGTGAT TTCACCAGCA
CAGCTCGCTT CTGAATACCC TCTCACTCAA GATGCTGCCG ATTATTTGGT GCAACAGCGC
CGTGAAGTTG AAGCCATTAT CGCAGGTGAA GATCAGCGTT TATTGGTGAT CATAGGCCCT
TGCTCCATTC ACGACACTAA AGCCGCACTT GAATATGCCG AGCGTTTAGC CGCATTGCAC
CACGAGCTTA AAGATGATTT GTGTATTTTA ATGCGAGTGT ATTTTGAAAA GCCGCGCACC
ATAGTGGGTT GGAAAGGACT CATTTCAGAT CCCGATCTCG ATGGTAGCTT CAGCCCCAAT
AAAGGCCTAC GTATGGCCCG TGAATTATTG CAGCAAATTA CCGAATTAAA ACTGCCCATC
GCCACCGAGT TCTTAGATAT GGTGAACGGT CAGTATATTG CCGACTTAAT TACTTGGGGG
GCTATCGGTG CCCGCACCAC AGAAAGCCAA ATTCACCGTG AAATGGCCTC GGCATTATCA
TGTCCTGTGG GCTTTAAAAA TGGCACAGAC GGCAACATCA GTATTGCCGT CGATGCAGTG
CGCGCCGCCG CCGCACCCCA TATCTTCTAC TCGCCAGATA AAGATGGCGC CATGGCCGTG
TATCGCACTC ACGGTAACCC TTATGGCCAC ATCATACTTC GTGGCGGTAA GACCCCAAAT
TACAGCGCCG AAGATATAGA AGTCGCCCGC GCCAAACTGG AACACGTGGG TGTAACCCAG
CGCATGGTGG TGGATTTCAG TCACGGTAAC AGTGAAAAGA AGCACAAAAA TCAGCTCAAT
GTGGCCGACA GCATCATGGC GCAGTTACGC GCTGGCAGCA CAGCCATCGC AGGCATCATG
GCAGAGAGTT TTATGATTGA AGGCAATCAA AAGGTGATCA CAGGTGAACC CCTAGTTTAC
GGTCAAAGCA TCACAGATGC TTGCCTGCAC TGGAGCGACT CTGAAAAACT ACTGCGTGAT
TTAGCCCAAG CCGCTAAAGA TCGTAAGGCG CTGCTATATA ATGCGTAA
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| Protein sequence | MTIKTDELRT SLLCKVISPA QLASEYPLTQ DAADYLVQQR REVEAIIAGE DQRLLVIIGP
CSIHDTKAAL EYAERLAALH HELKDDLCIL MRVYFEKPRT IVGWKGLISD PDLDGSFSPN
KGLRMARELL QQITELKLPI ATEFLDMVNG QYIADLITWG AIGARTTESQ IHREMASALS
CPVGFKNGTD GNISIAVDAV RAAAAPHIFY SPDKDGAMAV YRTHGNPYGH IILRGGKTPN
YSAEDIEVAR AKLEHVGVTQ RMVVDFSHGN SEKKHKNQLN VADSIMAQLR AGSTAIAGIM
AESFMIEGNQ KVITGEPLVY GQSITDACLH WSDSEKLLRD LAQAAKDRKA LLYNA
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