Gene Sden_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_2010 
Symbol 
ID4018499 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2386067 
End bp2386879 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content44% 
IMG OID637956032 
Producthypothetical protein 
Protein accessionYP_563016 
Protein GI91793365 
COG category[S] Function unknown 
COG ID[COG1806] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0129268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACCAA GAGTATTCTA CATATCTGAT GGCACAGCCA TCACAGCTGA AGTGTTTGGA 
CACGCGGTCC TATCGCAATT TCCAATAGAG TTTGAAGCAC TTACCATTCC TTTTGTGGAA
ACATTAGTCA AAGCTGAAAA AGTAAAGCTG CAAATAAATG ATTGTTTTAT TACAACAGGT
GAGCGACCAC TTGTGTTCCA TTCCATCGTC AATCCGGACA TTCGAAATGT GATTTATTCC
AGTGAAGGCA TGGATTATGA TTTTTTGAAC ACCTTTGTGG CGCCCCTTGA GCAACATTTA
GGCATTCAAG CCTGCCCTGT GCTGCACCGT ACTCATGGTA AAGGCAATCA CAGCTATGAA
GCCCGCATCG ACGCGATAAA TTTCTCTATG GAAAACGATG ACGGTCAAAC CATGAAGCAC
ATGGATAAAG CCGACATTAT TCTGTTAGGT GTATCCCGCT GTGGTAAGAC GCCTTCCAGC
CTGTACTTAT CTATGCAGTT TGGCATTAAG GCCGCCAACT ACCCCTTCAC CGAAGATGAC
ATGGACAACC TTAAGTTGCC TGACGCCTTA AAACGCAATA AAAACAAACT GTTTGGCTTA
ACCATAGATC CCAATCGTCT CCATGAAATC CGTCAATCTC GGATGGAAAA CAGCCGCTAC
TCCTCACTAA GGCAGTGCCG TTTAGAAGTC AAAGAAGTGG AGATGATGTA CAAGCGTGAG
CGCATTCCTT TTGTGGATAC CACCAACCAT TCGGTGGAAG AAATTGCCAC TAAAATCTTA
GATGTGACAG GTTTAGCACG GCATATGTTC TAA
 
Protein sequence
MAPRVFYISD GTAITAEVFG HAVLSQFPIE FEALTIPFVE TLVKAEKVKL QINDCFITTG 
ERPLVFHSIV NPDIRNVIYS SEGMDYDFLN TFVAPLEQHL GIQACPVLHR THGKGNHSYE
ARIDAINFSM ENDDGQTMKH MDKADIILLG VSRCGKTPSS LYLSMQFGIK AANYPFTEDD
MDNLKLPDAL KRNKNKLFGL TIDPNRLHEI RQSRMENSRY SSLRQCRLEV KEVEMMYKRE
RIPFVDTTNH SVEEIATKIL DVTGLARHMF