Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_2007 |
Symbol | |
ID | 4018496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2379838 |
End bp | 2380386 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637956029 |
Product | hypothetical protein |
Protein accession | YP_563013 |
Protein GI | 91793362 |
COG category | [S] Function unknown |
COG ID | [COG3816] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.95415 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACAGAGC CTAAGCCGGT AAAACAGGAT AAACCCAAGC TTAAGCAAGA GACGCCTGAG CAAGCCAAGT TGCAAGCACA GACGTCAGAG TCCGGCGAGC GAGCATTGAG GCAGTTTTTA CCGGAACATG TTCCCCTGTG TGATGACCTT AGTCAGGCGC CCTTGTTTGA CATAGACGGC GAGGGAAACT GGCACTATTT ATCCAGCCCC TTGCCGGCTA AATTTGCCAA GCTGTTTGCC AGTATTTTAT ATTGCATAGA GGGGCAGCAC TACCTGATAA CCCCGGTTGA GAAGTTACGG GTACAGCTAG TCGCATCGCC TTTGGTTATG GTCGACTATG AAGTGATTGA AGGTGATAAA CTCAAATTTA TCAGCAGTAT AGGCATCGAG TACTCAGTGC TGATTCGCGA TATTGACATC AAGCATGACG GCATTCATTT ACCCTTAGCG CGAGGTTTAA CGGCGCGCCT AGGCCGCGCC TGCTATTATC GCTATATCAA TGAGTTTATT GTTAATGCAA GTCAAGATAC TGGCTTAATG GGCAGTTAG
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Protein sequence | MTEPKPVKQD KPKLKQETPE QAKLQAQTSE SGERALRQFL PEHVPLCDDL SQAPLFDIDG EGNWHYLSSP LPAKFAKLFA SILYCIEGQH YLITPVEKLR VQLVASPLVM VDYEVIEGDK LKFISSIGIE YSVLIRDIDI KHDGIHLPLA RGLTARLGRA CYYRYINEFI VNASQDTGLM GS
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