| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1998 |
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| Symbol | |
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| ID | 4018487 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2364141 |
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| End bp | 2366711 |
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| Gene Length | 2571 bp |
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| Protein Length | 856 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 637956020 |
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| Product | ATP-binding region, ATPase-like protein |
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| Protein accession | YP_563004 |
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| Protein GI | 91793353 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAATTC CCCTTTCAAT GACTAAATCT GTCATCCTTG CTGTGGCTCT TTTGCTGATA
TTGTGGGCCG CTGTCATCGT TAAAACCTGG CTGCTTATTC AGCATGAACA ACGACAGTCA
ATCCTTGATG AATATTATTT ACTCACAGAT CAAGCTTATG AAGCGTTAAA TAATAGCTTT
AATCTATTCA ATATGTTGGG AATAGAGACT CAAGATGAAG GCGAACTCGC TGCTGAATAT
TTAGCTAAGG TACAGAAGAC TTACGATATT TTGGCTCCCA ACACTTGGCT GAAAAACTTG
AGTGTTGTGT TTATCGCCGA AACGAAGGAA AACCTACAAT TAGACTTAAT CTGGCAAAGT
GATCCTAACG AGGCTAACTC AATAAAGTTT TTGGCTGGCT CAGGTGATAC TGAATTGCGT
GAAATTTTAC TCGGTACGTC TAAAGAGATT GATTGGAAAA ATGTCAACAG TAAGCATTTA
TTTATCGTGC CTTTCAACGA AAGAGTGGAG GATAGTGAGC AAAAGCTCTA TCACCTCACC
GAGTTGCTTG GTGAGGAACA AGGGGACGTT CAAAAGGAAG CGACAAAACA CCGTTATATT
GTCATATTAG AATTATCGGC AACCAGCTGG TTTAGTCAAT ATAAAAAAGG CATGCCTCCC
TGGCTTTCCA TACAATATCT ATTGTTGAGT GATTTTGAAT TACAACAACC AGAAGCATTC
TCGAAAATAA AGAATTTTAA CCATGTAGAT TACTCAAACC TTCATGTTTT ACCAAGAATA
AATACCAGCG AAATAAACAA TGTTGAGCAC AATAGAATAG CGGTATTATC AAAAGGTACG
CTGCCATTTG TTTTTGTCAC TGCCTTTGAT GCGAGTAAAA TCTCTGCAAG TCCATTCAGG
CATCGTTTAT TTTTGATAGT TTTAGCTTTT GGCTTATTTA TAATGATAAC CATAGTGTTT
TATGTCTATC GTTTAGAAAC TGACAGGGTC AAGTTAAATC TGGCTGTGTC CGCAGCTACG
GATAAGTTGT TATATGCCAA CCAAACGGTA GAGCAGCAAA AAAACTACTT GAAGGAAATT
ATCAACAGCA GCATTAATGG CATAGTGACG GCATCAAGGA GTGGCATAAT TGAAAGCTTT
AGTAAAGCCG CGGAACATAT ATTTGGCTGG TCAGAGCAAG AAGTCATTGG GAAAAATTTA
ACACTTTTGA TGCCTGAACC TTTTCAAAGT GAACATGATG GCTATTTACA CCGTTATCAT
AAAGCTAATG AAAGCAAAGT CATTGGAGTT GAACGCTTAG TTAAGGGTAA GCACAAAAAT
GGATTTATCA TAGATATTAA ATTAGCTGTA CTTGCAAGTG AAATCAATGG TCGTTCAATT
TTTATTGGCT TCATTGGTGA TATGAGTGAA ACAGAAACAC TGAGGTTTGA ACGAGAGACA
TTCTTTGATA TCTCACCCGA ATTAATTTGT TTAATCAGTG CCGACGGTTA CTTCAAACAA
GTGAATCAGT CATGGTGTAA CCTACTAGGC TACAACATGG AGGAACTGCT CAACACGCCA
TTTGCTGATT TTCTGCATCC AGAGGATAGA GCAAGCGGCA TGGATGAAAT GAACAAATTA
CAGACTCCTG GTTATAGAAC GGTTAACTTT GATAATCGGT ATCGTGATAA ATCGGGAGCA
TATCACTGGT TTCAATGGAA TGCGGTACTT AATCATGGCA ATGACATTAT CTATGCAAGT
GCTCGTGATG TGACCAAAGA AAAAAACCAA CAACAATTTT TACAGCAAAC TAATGAAAAG
ATGCGGTTAG TCAATACTAA ACTACAGCAG TTAGATGGTT TGAAATCTAT GTTTATTGCC
ACTATGTCAC ATGAATTGAG AACACCACTC AATTCTATTA TTGGCTTTAG TAGCGTGATG
TTGCAGGGAC TTTCAGGTCA ATTAACAGGG GTTCAAGTTG ATCATTTAAC TCGGATCCAC
AAGGCTTCAC AACATTTACT CACTATTATC AGCGACATTA TTGATGTGTC AAAGATTGAA
GCAGAGCGAT TTGATTCTGC CAATGAGTCG TTTTATTTAC ACGAAGTTGC ACAAGAAGTT
ATTACCTTAG CTCACGGCCT GTCGATGCAA TATAAGATTG CAGTGGTAAT GGTGATTTCA
CAAGAACTGA TATTGTTTAC TGATCTTCGG CGAGTTAAGC AAGTCTTACT TAATTTAGTC
AGCAATGCCA TTAAATATTC CTTACAAGGG CAGGTCACCA TAACCGCTTC TGTCGAAGGT
TTAAACATTT TGATGTCTGT CATAGATCAA GGTATTGGCA TTCGTGAGCA AGATATTCCC
GCTTTATTTA AGCCATTTTC AAGGTTAGAT GCCATGCGTG TTGAACGTAG TGGTACTGGA
TTGGGATTAT ATTTAACAAA AAAAATTGTC GATGGGATTT TGTTAGGTTC AATTACCGTG
ACAAGTTCGG TTGGTGTGGG TTCTCGTTTT GAGGTGATAA TACCAAAGAC GCGGGATTGG
CAGTTACACA GTGGACAGTA TAATGACACA ACTTACCGCG CTGATTATTG A
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| Protein sequence | MKIPLSMTKS VILAVALLLI LWAAVIVKTW LLIQHEQRQS ILDEYYLLTD QAYEALNNSF
NLFNMLGIET QDEGELAAEY LAKVQKTYDI LAPNTWLKNL SVVFIAETKE NLQLDLIWQS
DPNEANSIKF LAGSGDTELR EILLGTSKEI DWKNVNSKHL FIVPFNERVE DSEQKLYHLT
ELLGEEQGDV QKEATKHRYI VILELSATSW FSQYKKGMPP WLSIQYLLLS DFELQQPEAF
SKIKNFNHVD YSNLHVLPRI NTSEINNVEH NRIAVLSKGT LPFVFVTAFD ASKISASPFR
HRLFLIVLAF GLFIMITIVF YVYRLETDRV KLNLAVSAAT DKLLYANQTV EQQKNYLKEI
INSSINGIVT ASRSGIIESF SKAAEHIFGW SEQEVIGKNL TLLMPEPFQS EHDGYLHRYH
KANESKVIGV ERLVKGKHKN GFIIDIKLAV LASEINGRSI FIGFIGDMSE TETLRFERET
FFDISPELIC LISADGYFKQ VNQSWCNLLG YNMEELLNTP FADFLHPEDR ASGMDEMNKL
QTPGYRTVNF DNRYRDKSGA YHWFQWNAVL NHGNDIIYAS ARDVTKEKNQ QQFLQQTNEK
MRLVNTKLQQ LDGLKSMFIA TMSHELRTPL NSIIGFSSVM LQGLSGQLTG VQVDHLTRIH
KASQHLLTII SDIIDVSKIE AERFDSANES FYLHEVAQEV ITLAHGLSMQ YKIAVVMVIS
QELILFTDLR RVKQVLLNLV SNAIKYSLQG QVTITASVEG LNILMSVIDQ GIGIREQDIP
ALFKPFSRLD AMRVERSGTG LGLYLTKKIV DGILLGSITV TSSVGVGSRF EVIIPKTRDW
QLHSGQYNDT TYRADY
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