Gene Sden_1992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1992 
Symbol 
ID4018481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp2356734 
End bp2357294 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content45% 
IMG OID637956014 
Productelongation factor P 
Protein accessionYP_562998 
Protein GI91793347 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.000000014351 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAACTG CTCATGAAAT CCGTCCTGGT AACGTGATCA TGTTAGATGG CAGCCCATGG 
GTTGTGCAGA AAACTGAAAC TACCCGTTCT GGCCGTAACG CTGCTATCGT AAAATTGAAG 
TTAAAGCACG TGCTGCTTGA TTCTGGCACA GAACAGACCT TCAAAGGCGA AGACAAGATG 
GACGTTATCG TTCTTGAACG TCTTGATTGC ACTTACTCTT ACTTTGCTGA TCCTATGTAT 
GTTTTCATGG ATGCTGATTA CAACCAGTAT GACGTTGAAG CTGACAACCT AGGTGATGCT 
GCAGCCTATA TCATCGATGG TATGGAAGAA ACTTGCCAAG TGACCTTCTA CGAAGGCAAG 
GCAATTTCTG TTGAATTACC GACTCATATT GTTCGTGAAG TGATTTACAC TGAGCCTTCA 
GCTCGTGGCG ATACTTCTGG TAAAGTCATG AAGCCTGCAA CCATCACTGG CGGCGGTACT 
GTGACTGTGG CTGACTTCGT TAAAGTTGGC GACAAGATTG AAATCGACAC TCGCACTGGT 
GAATTCAAGA AGCGCGCTTA A
 
Protein sequence
MKTAHEIRPG NVIMLDGSPW VVQKTETTRS GRNAAIVKLK LKHVLLDSGT EQTFKGEDKM 
DVIVLERLDC TYSYFADPMY VFMDADYNQY DVEADNLGDA AAYIIDGMEE TCQVTFYEGK 
AISVELPTHI VREVIYTEPS ARGDTSGKVM KPATITGGGT VTVADFVKVG DKIEIDTRTG 
EFKKRA