Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1990 |
Symbol | |
ID | 4018479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | + |
Start bp | 2354886 |
End bp | 2355413 |
Gene Length | 528 bp |
Protein Length | 175 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637956012 |
Product | flavodoxin FldA |
Protein accession | YP_562996 |
Protein GI | 91793345 |
COG category | [C] Energy production and conversion |
COG ID | [COG0716] Flavodoxins |
TIGRFAM ID | [TIGR01752] flavodoxin, long chain |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000000683381 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAACTG TAGGTCTTTT TTTCGGTAGC GACACTGGCA ACACCGAAGC CATCGCCAAA ATGATCCAGA AAAAACTGGG TAAGCAGATG GTAGATGTTA AAGACATCGC TAAGAGCACT AAAGAGCAAA TCGCCGAGTT CGATATGATA CTGTTTGGCA TCCCAACTTG GTATTATGGC GAAGCTCAGT GTGATTGGGA TGACTTCTTC CCTGAACTTG AGCAAATTGA TTTTACTGAT AAGCTAGTGG CTATTTTCGG CTGTGGCGAT CAAGAAGACT ATTCAGAATA CTTCCTCGAT GCCATGGGCA TGGTGGGTGA CATAGTCCAA GCCCGCGGCG GCATTATTGT CGGTCACTGG CCCATTGAAG GCTATGATTT TGAAGCCTCT AAAGGCCAAG TGGATGACAA GCATTTCATC GGCTTAGGCA TAGATGAAGA CCGTCAGCCA GAGCTAACCG AAGGCCGCGT CGATGCTTGG GTTAAGCAAA TTTATGAAGA AATGTGCTTA GCAGAATTAG CTGACTAG
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Protein sequence | MATVGLFFGS DTGNTEAIAK MIQKKLGKQM VDVKDIAKST KEQIAEFDMI LFGIPTWYYG EAQCDWDDFF PELEQIDFTD KLVAIFGCGD QEDYSEYFLD AMGMVGDIVQ ARGGIIVGHW PIEGYDFEAS KGQVDDKHFI GLGIDEDRQP ELTEGRVDAW VKQIYEEMCL AELAD
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