Gene Sden_1990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1990 
Symbol 
ID4018479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2354886 
End bp2355413 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content46% 
IMG OID637956012 
Productflavodoxin FldA 
Protein accessionYP_562996 
Protein GI91793345 
COG category[C] Energy production and conversion 
COG ID[COG0716] Flavodoxins 
TIGRFAM ID[TIGR01752] flavodoxin, long chain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000683381 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAACTG TAGGTCTTTT TTTCGGTAGC GACACTGGCA ACACCGAAGC CATCGCCAAA 
ATGATCCAGA AAAAACTGGG TAAGCAGATG GTAGATGTTA AAGACATCGC TAAGAGCACT
AAAGAGCAAA TCGCCGAGTT CGATATGATA CTGTTTGGCA TCCCAACTTG GTATTATGGC
GAAGCTCAGT GTGATTGGGA TGACTTCTTC CCTGAACTTG AGCAAATTGA TTTTACTGAT
AAGCTAGTGG CTATTTTCGG CTGTGGCGAT CAAGAAGACT ATTCAGAATA CTTCCTCGAT
GCCATGGGCA TGGTGGGTGA CATAGTCCAA GCCCGCGGCG GCATTATTGT CGGTCACTGG
CCCATTGAAG GCTATGATTT TGAAGCCTCT AAAGGCCAAG TGGATGACAA GCATTTCATC
GGCTTAGGCA TAGATGAAGA CCGTCAGCCA GAGCTAACCG AAGGCCGCGT CGATGCTTGG
GTTAAGCAAA TTTATGAAGA AATGTGCTTA GCAGAATTAG CTGACTAG
 
Protein sequence
MATVGLFFGS DTGNTEAIAK MIQKKLGKQM VDVKDIAKST KEQIAEFDMI LFGIPTWYYG 
EAQCDWDDFF PELEQIDFTD KLVAIFGCGD QEDYSEYFLD AMGMVGDIVQ ARGGIIVGHW
PIEGYDFEAS KGQVDDKHFI GLGIDEDRQP ELTEGRVDAW VKQIYEEMCL AELAD