Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1959 |
Symbol | |
ID | 4018448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2321894 |
End bp | 2322544 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955981 |
Product | hypothetical protein |
Protein accession | YP_562965 |
Protein GI | 91793314 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00145521 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATTAT CATGCTTAAG TGGCGGTCTT TTGAGCCTAG CAATGGCGTT GAATGCAACC TCTGTCAGTG CAGAAACCGT CTCACTGGAA TACGTGGGTT TCTATGACAG GTTAAAGCAA GTGAATAAGC ACAACTATCC ACTGGCTGAG CTTGCTTTTA GCGTGCCTAA AACTCCAGAT TGCACCATTA TCTCTGGCAA CATCACCACA GTAAAGACCA GTGCACCGCT GTCTTATGAT GAGTCTCAGC GTTTATTCCT GCCCTTCGAT GCCGAGTTTA AGTCAGATCG CGGTCTCATT AATTTAGAGA TGACAGGTAA AGCTGAAAGC TGCGCCATTG CCATGCAAGT GCGGGCTAAA TCTGTGCAGC AAGACTACAA GAAAATCGAG TTGTTGCAAG TAAAGGCTGA CATGGATGCG CTGCTTGATG GCTTGCAGGG GTTCCCGATG AAGTATTTCA GAAAACCCTT AAGCGGATTA ACCTTTGAGT TTGCCGCTGG TGCTTTGCAG AGCCCAGTAA TACGCCTGAA TGGCATTGAA CAGCCGCTCA CAGAGCAAGG CCGTTTTACC TTAACCAACG GGCAGATTGA CCAGTTAGAA CAGTTGCAGT TTAGCGTTAA GCCGTTAGTG TTAAGTCCGC TTATAGACTA A
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Protein sequence | MKLSCLSGGL LSLAMALNAT SVSAETVSLE YVGFYDRLKQ VNKHNYPLAE LAFSVPKTPD CTIISGNITT VKTSAPLSYD ESQRLFLPFD AEFKSDRGLI NLEMTGKAES CAIAMQVRAK SVQQDYKKIE LLQVKADMDA LLDGLQGFPM KYFRKPLSGL TFEFAAGALQ SPVIRLNGIE QPLTEQGRFT LTNGQIDQLE QLQFSVKPLV LSPLID
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