Gene Sden_1959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1959 
Symbol 
ID4018448 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2321894 
End bp2322544 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content47% 
IMG OID637955981 
Producthypothetical protein 
Protein accessionYP_562965 
Protein GI91793314 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00145521 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTAT CATGCTTAAG TGGCGGTCTT TTGAGCCTAG CAATGGCGTT GAATGCAACC 
TCTGTCAGTG CAGAAACCGT CTCACTGGAA TACGTGGGTT TCTATGACAG GTTAAAGCAA
GTGAATAAGC ACAACTATCC ACTGGCTGAG CTTGCTTTTA GCGTGCCTAA AACTCCAGAT
TGCACCATTA TCTCTGGCAA CATCACCACA GTAAAGACCA GTGCACCGCT GTCTTATGAT
GAGTCTCAGC GTTTATTCCT GCCCTTCGAT GCCGAGTTTA AGTCAGATCG CGGTCTCATT
AATTTAGAGA TGACAGGTAA AGCTGAAAGC TGCGCCATTG CCATGCAAGT GCGGGCTAAA
TCTGTGCAGC AAGACTACAA GAAAATCGAG TTGTTGCAAG TAAAGGCTGA CATGGATGCG
CTGCTTGATG GCTTGCAGGG GTTCCCGATG AAGTATTTCA GAAAACCCTT AAGCGGATTA
ACCTTTGAGT TTGCCGCTGG TGCTTTGCAG AGCCCAGTAA TACGCCTGAA TGGCATTGAA
CAGCCGCTCA CAGAGCAAGG CCGTTTTACC TTAACCAACG GGCAGATTGA CCAGTTAGAA
CAGTTGCAGT TTAGCGTTAA GCCGTTAGTG TTAAGTCCGC TTATAGACTA A
 
Protein sequence
MKLSCLSGGL LSLAMALNAT SVSAETVSLE YVGFYDRLKQ VNKHNYPLAE LAFSVPKTPD 
CTIISGNITT VKTSAPLSYD ESQRLFLPFD AEFKSDRGLI NLEMTGKAES CAIAMQVRAK
SVQQDYKKIE LLQVKADMDA LLDGLQGFPM KYFRKPLSGL TFEFAAGALQ SPVIRLNGIE
QPLTEQGRFT LTNGQIDQLE QLQFSVKPLV LSPLID