Gene Sden_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1954 
Symbol 
ID4018443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2318105 
End bp2318518 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content47% 
IMG OID637955976 
Productferredoxin 
Protein accessionYP_562960 
Protein GI91793309 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0153263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACTTATA AAACCTTCAC AAAAGCGCCC ATAATCAGCT TGAAATTGCA GCCCGTCATC 
TTGTTTGATG GGCAGCAAGC CACCCTGCTT GAAGCCTTAG AAGATAAAAA GGTGAAGATA
TTTTCAGAGT GTCGCAATGG ATTTTGCGGC GCCTGTAAGA CCCAAGTGCT GGCGGGTGAA
GTGACTTACA TTAAGGAACC TATTGCCAGC CTTAAACAGG ACGAATGCCT GCCCTGTTGC
TGTATTCCCA AAACTGATCT CAGTCTGAAC CTTTCCACCG AGGGGGTTGA GCTTATCGCA
AGGCCGCTTT GTGCGACTGC GGTTAAGAAA AAAGTACTGC AGAGCCGCAC TAACCAAGAA
GCCATTCAAA CCAACAAATC AAACTTATCG ATTTCACAGC GCGATACCGC CTAA
 
Protein sequence
MTYKTFTKAP IISLKLQPVI LFDGQQATLL EALEDKKVKI FSECRNGFCG ACKTQVLAGE 
VTYIKEPIAS LKQDECLPCC CIPKTDLSLN LSTEGVELIA RPLCATAVKK KVLQSRTNQE
AIQTNKSNLS ISQRDTA