| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1949 |
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| Symbol | |
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| ID | 4018438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2309782 |
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| End bp | 2310510 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955971 |
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| Product | 3-demethylubiquinone-9 3-methyltransferase |
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| Protein accession | YP_562955 |
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| Protein GI | 91793304 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
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| TIGRFAM ID | [TIGR01983] ubiquinone biosynthesis O-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00359705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCAACG ACACACACAC GACTCAGGCA AACGTTGACC CCGCCGAAAT CGCCAAATTT
GAAGCCATGG CACAAAGTTG GTGGGATCCC AATGGCGAGT TTAAGCCTTT GCATCAACTC
AACCCCTTAA GGCTCAATTA TATCGACAGC ACGGCTGGCG GCATTTTTGC TAAAAAGGTG
TTGGACGTGG GCTGTGGCGG CGGCATTTTA TCAGAAAGCA TGGCAAAACT TGGCGCCAAT
GTAGACGGCA TAGACATGGG CGAGGCGCCC TTAGAAGTGG CTCGTCTGCA CGCCTTAGAA
TCTGGCGTCA TGGTGAATTA CCACAAGACC ACCGCAGAAG CGCATAGCGC GAGCCATGCA
AACCATTACC AAGTGGTAAC CTGCATGGAA ATGCTTGAAC ATGTGCCGGA TCCCCAATCC
GTCATTCAAG CTTGTTGCGA CATGGTAGAA CCGGGCGGCT TTGTGTTTTT CTCAACCATT
AACCGCAATA TGCTCTCCTA CGTACAAGCC ATCTTAGGGG CTGAGTATCT GTTAAAGCTC
CTGCCCATAG GCACGCACGA TCACAGTAAG TTTATTCGCC CGTCTGAACT CATGGCCATG
GTGGATAATA CTGACTTAAT CTGTAAAGAC GCCCTTGGCA TTAGCTTCAA TCCGCTGACC
TCTATCTTCA GTTACACCAA AAGTCTTGAG GTGAACTACA TGATAGCCAC CCAGAAGATG
GCCGATTAA
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| Protein sequence | MPNDTHTTQA NVDPAEIAKF EAMAQSWWDP NGEFKPLHQL NPLRLNYIDS TAGGIFAKKV
LDVGCGGGIL SESMAKLGAN VDGIDMGEAP LEVARLHALE SGVMVNYHKT TAEAHSASHA
NHYQVVTCME MLEHVPDPQS VIQACCDMVE PGGFVFFSTI NRNMLSYVQA ILGAEYLLKL
LPIGTHDHSK FIRPSELMAM VDNTDLICKD ALGISFNPLT SIFSYTKSLE VNYMIATQKM
AD
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