| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1946 |
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| Symbol | |
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| ID | 4018435 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2303975 |
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| End bp | 2305351 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955968 |
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| Product | L-serine dehydratase 1 |
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| Protein accession | YP_562952 |
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| Protein GI | 91793301 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1760] L-serine deaminase |
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| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAGTG TATTTGACAT GTTCAAGATA GGCATTGGCC CTTCAAGCTC ACACACAGTA
GGCCCGATGA AAGCGGGTAA GTTCTTTATT GAGCGTATAG AGCGCCTTGG CTTATTGGAA
CAAACCGATG AGCTGCAAGC CGAACTCTTT GGATCCCTAG GCCAGACAGG CAAAGGCCAT
GGTACAGGCA AGGCCGTCAT TTTAGGCTTG ATGGGCGAAA ACCCTGAAAC CGTAGACACC
AATGGCATCG ACGAAATATT AATTCGCGCC TCAGAAGATC AACTGCTTAA ATTGGCCAGC
GGCCGATATA TTAAGTTCAC CCGTGAAAAT GGGATTACTT TCCATCGCCG CAAAAGCCTG
CCAGCTCACG CTAACGCCAT GACCTTATAT GCCTTGGCCG GCGGTGAAAT TATTTATCAG
CGCACTTACT ATTCGGTGGG CGGCGGCTTT ATCTTAGATG AAGATGAAAT CGCAGAGCGT
AATGCATCCC CCGCCACGCC TATAGAGTGT GCCCCCTATG AGTTTAATAG TGCGGCGCAG
CTGTTAGATA TGTGTTCTGA CAATGGCCTC AGTATTTCAT CATTAATGAT GGCCAATGAG
CTTAGCATCG CCAAGGAAGA TGACGTTAAA AATGGCTTAT GGCATATTTG GCAAACCATG
AAGGCCTGTG TTGAACGGGG TTACCAAAAA GAAGGTATTT TACCCGGCGG CCTTAAACTT
CGCCGCCGCG CCCCAGCCCT TTATCGCCGC CTAAAAGCCG AGGGGCGTAA TAATATCGAC
CCATTAACGG CCATGGATTG GGTCGACTTG TTTGCCCTGT CTGTGAATGA GCAAAATGCG
GCGGGCGATC GTGTGGTCAC TGCACCCACC AATGGCGCTG CCGGCATTAT CCCCGCAGTA
TTATGCTATT ACGATATGTT CGTGCAAGAA GTGGATATCG ACGTGTGCAG CCGCTATTTA
CTCACAGCCG CTGCTATTGG CATTTTATAC AAGAAAAATG CCTCGATTTC TGGCGCCGAA
GTGGGTTGTC AGGGTGAAGT GGGTGTCGCT TGCTCCATGG CGGCCGGCGC CTTGACTGAA
ATCATGGGCG GCACGGTTGA GCATGTGGAA AACGCCGCAG AAATTGGTAT GGAACATAAC
CTAGGCTTAA CTTGCGATCC CGTTGGCGGC CTAGTGCAAG TGCCCTGCAT CGAGCGTAAT
GCCATGGGCG CAATTAAGGC CATTAACGCC TCACGCATGG CCCTTCGCGG TGACGGAAAT
CACAAAGTGT CTTTAGATAA AGTCATCAAA ACCATGATGG ACACAGGTAA AGACATGCGC
AGTAAATATA AGGAAACCGC CAAAGGTGGC CTCGCGGTAA ACATAGTCGA ATGTTAA
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| Protein sequence | MISVFDMFKI GIGPSSSHTV GPMKAGKFFI ERIERLGLLE QTDELQAELF GSLGQTGKGH
GTGKAVILGL MGENPETVDT NGIDEILIRA SEDQLLKLAS GRYIKFTREN GITFHRRKSL
PAHANAMTLY ALAGGEIIYQ RTYYSVGGGF ILDEDEIAER NASPATPIEC APYEFNSAAQ
LLDMCSDNGL SISSLMMANE LSIAKEDDVK NGLWHIWQTM KACVERGYQK EGILPGGLKL
RRRAPALYRR LKAEGRNNID PLTAMDWVDL FALSVNEQNA AGDRVVTAPT NGAAGIIPAV
LCYYDMFVQE VDIDVCSRYL LTAAAIGILY KKNASISGAE VGCQGEVGVA CSMAAGALTE
IMGGTVEHVE NAAEIGMEHN LGLTCDPVGG LVQVPCIERN AMGAIKAINA SRMALRGDGN
HKVSLDKVIK TMMDTGKDMR SKYKETAKGG LAVNIVEC
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