| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1945 |
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| Symbol | |
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| ID | 4018434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2302607 |
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| End bp | 2303620 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637955967 |
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| Product | beta-hexosaminidase |
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| Protein accession | YP_562951 |
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| Protein GI | 91793300 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTTATT TGATGATGGA TTTGCAAGGG CTAAGTGTTA GCGAGCATGA GTCAAACTTA
TTAGCCCACC CGATGGTAGG CGGTATTATT CTGTTTACTC GTAATTTTGC TAATAAAGCG
CAGCTTATCG AGTTAGTGCA GCAAGTCCGT GCCATTCGGC CAGAACTGCT TATCGCTGTC
GATCATGAAG GCGGCAGGGT GCAGCGTTTT CGAGACGGCT TTAGTGCCAT TCCTGCCATG
GGGGATATTC TACCCAGCGC TAAAGGCGAT ATGAGTTTAG CGAAACGCTG GGCTAAAGAA
GCAGGTTTCT TAATGGCCAT AGAGCTACTG GAATGCGATA TCGACTTAAG TTTTGCCCCA
GTGTTAGATG TTAACGGCAT TAGCCAAGTC ATAGGAAAAC GCAGCTTCAG TCCAGCCCCT
GAGGAAATAT CTATATTAGC TAGCGAATTT ATTCATGGCA TGAATCAAGC GGGTATGGCC
GGCGTGGGTA AACATTTTCC AGGTCACGGC AGTGTCGCCG CTGACTCACA CATTGCCATG
CCAGTAGATA ATCGCACTAA GGATGAAATA TTTTCACATG ATATGCGGCC GTTCTCTCAA
CTTATTAACG CTGGAATGCT GGCGGGTGTG ATGCCCGCCC ATGTGGTCTA TGCCCAGGTT
GACCCTAACC CTGCAGGCTT CTCATCATAC TGGTTACAAC AGGTGCTTCG CGGCGAGCTT
AATTTCAACG GGGTGATTTT CTCCGATGAT TTAGGCATGA AAGGTGCCCA TTTTGCCGGT
GATTATCTGG GCCGCGCTAG CGCTGCATTA AATGCAGGCT GCGACATGAT CTTGGTCTGT
AACGATCCCG CTGGGGTTGA AGTGCTATTG AATACATTTG TTTGGCCAGA GGACGCCCCT
AAGGCCAATG CCAGCAGCCT GTTACTCAAT AATTCGCAGC GCCAGTTAGC CATTGCAGAT
AAGCAGCGTA TCGCGTCGGC TAAGGTGATG ATGGCCAGCA TAGCCCTCGA CTGA
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| Protein sequence | MSYLMMDLQG LSVSEHESNL LAHPMVGGII LFTRNFANKA QLIELVQQVR AIRPELLIAV
DHEGGRVQRF RDGFSAIPAM GDILPSAKGD MSLAKRWAKE AGFLMAIELL ECDIDLSFAP
VLDVNGISQV IGKRSFSPAP EEISILASEF IHGMNQAGMA GVGKHFPGHG SVAADSHIAM
PVDNRTKDEI FSHDMRPFSQ LINAGMLAGV MPAHVVYAQV DPNPAGFSSY WLQQVLRGEL
NFNGVIFSDD LGMKGAHFAG DYLGRASAAL NAGCDMILVC NDPAGVEVLL NTFVWPEDAP
KANASSLLLN NSQRQLAIAD KQRIASAKVM MASIALD
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