| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1943 |
|---|
| Symbol | |
|---|
| ID | 4018432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2300521 |
|---|
| End bp | 2301711 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637955965 |
|---|
| Product | Acetyl-CoA C-acetyltransferase |
|---|
| Protein accession | YP_562949 |
|---|
| Protein GI | 91793298 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
|---|
| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCAG TCCAATCAAA CCAAGATATC GTTATTGTTG CAGCTAAGCG CACCCCTATG
GGCGGCTTTC AAGGCGCCTT AAGCGGCGTG GCATCTCCTG TATTAGCGGC CACTGCCATT
AAAGACTTAT TGGAACAAAC AGGGATTGCC GCCAGTGCTG TTAACGAAGT ACTGATGGGC
TGTGTGTTGC CAGCTGGCCT TGGCCAAGCG CCTGCGCGTC AAGCAACCTT AGGTGCAGGC
TTACCTTTAA GTGTCGGCGC CACCACAGTG AACAAGGTCT GTGGTTCAGG CATGAAAACT
GTGATGTTAG CCCACGATTT AATCAAGGCC GGTAGCAGTG AAGTGGTGAT TGCAGGTGGC
ATGGAAAGCA TGAGTCAAGC ACCATACTTG CTTGATAAAG CCCGCTCTGG CATGCGCATG
GGCCACGGCA AAGTCATGGA CCACATGTTT TTAGATGGCT TAGAAGATGC CTACACAGGC
GGCGCTATGG GCACATTCGC CCAAAAAACC GCCGATGACT TTAACCTGAG CCGTGAGCAA
ATGGATGGTT TTGCCCTAAG TTCATTAGAA AAAGCCAATG CCGCCATCAA TTCAGGTGCC
TTTAAAGCGG AAATTACCCC AGTAACCGTG AGCGATCGCC GCGGTGATAT CACCATAGAT
ACCGATGAAC AGCCAGGTAA CGCACGTCCA GAAAAAATCC CGACACTGCG CCCAGCCTTC
ACCAAAGACG GCACTATTAC CGCCGCTAAT TCGAGCTCAA TTTCAGATGG CGCCGCGGCG
TTAATGTTAA TGACAAGGGA GAAAGCCAGC AGTTTAGGTC TTGAGGTGAT GGCGACCATT
AAAGGCCACA GTACTCACGC CCAAGAGCCG TCGTTATTTA CCACAGCGCC CGTGGGGGCC
ATGAACAAGT TGCTGGATAA AGTGAACTGG AACAAGGATG AAGTGGATTT ATTTGAAATC
AACGAAGCCT TTGCCATGGT GACCATGTTA GCCATTTCTG AACTGGGTTT AGATGCCAAC
AAGGTTAACG TCAATGGCGG CGCCTGCGCC TTAGGTCACC CTATTGGCTG CTCAGGCTCG
CGCCTGTTGG TTACCTTGAT TTATGCATTG AAAGCCCGCG GCCTTAAGCG CGGCGTGGCA
TCATTATGCA TAGGTGGCGG TGAAGCCACG GCCATGGCCA TTGAAGTTTA A
|
|---|
| Protein sequence | MSSVQSNQDI VIVAAKRTPM GGFQGALSGV ASPVLAATAI KDLLEQTGIA ASAVNEVLMG
CVLPAGLGQA PARQATLGAG LPLSVGATTV NKVCGSGMKT VMLAHDLIKA GSSEVVIAGG
MESMSQAPYL LDKARSGMRM GHGKVMDHMF LDGLEDAYTG GAMGTFAQKT ADDFNLSREQ
MDGFALSSLE KANAAINSGA FKAEITPVTV SDRRGDITID TDEQPGNARP EKIPTLRPAF
TKDGTITAAN SSSISDGAAA LMLMTREKAS SLGLEVMATI KGHSTHAQEP SLFTTAPVGA
MNKLLDKVNW NKDEVDLFEI NEAFAMVTML AISELGLDAN KVNVNGGACA LGHPIGCSGS
RLLVTLIYAL KARGLKRGVA SLCIGGGEAT AMAIEV
|
|---|
| |