| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1942 |
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| Symbol | |
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| ID | 4018431 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2298806 |
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| End bp | 2300311 |
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| Gene Length | 1506 bp |
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| Protein Length | 501 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955964 |
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| Product | methylmalonate-semialdehyde dehydrogenase |
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| Protein accession | YP_562948 |
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| Protein GI | 91793297 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACAACAG CACAAATCAC ACAAGTTAAG CATTACATCA ATGGCGAGTT CACCACAGGC
TCAGGCACCT CAGTTATCCC TGTGACTAAC CCGGCCAACA ACTCGGTTAT CGCTCATATC
AATAGCGCTA CCACAGAAGA AGTGGAAATG GCCATTAGCA GCGCCAAAGA AGCCTTTAAA
ACCTGGAAAG AAGTGCCAGT GTCTGAGCGT GCCCGTGTCA TGTTGCGCTA CCAGCATTTG
TTAAAAGAAC ACCATGACGA GCTCGCGACC ATATTGGCAC ACGAGACAGG TAAAACCTTC
GAAGATGCTA AAGGCGATGT GTGGCGCGGC ATAGAAGTGG CGGAGCATGC ATGCAATATT
GCCTCACTGA TGATGGGAGA AACCGTTGAA AACGTGGCGC GCAATATCGA TACCTACAGC
TACACCCAAC CATTAGGTGT GTGCGCCGGT ATTACCCCGT TTAACTTCCC AGCCATGATC
CCATTATGGA TGTTCCCGTT ATCAATCGCA TGCGGTAACA CCTTCATTCT TAAGCCGTCA
GAGCAAGATC CCATGACGCC CCAGCGCTTA GTTGAGCTGT TTGTCGAAGC GGGCGCACCT
AAGGGCGTGC TACAGCTTAT TCACGGTGAC AAAACGGCTG TCGATATTCT ATTGCGCGAC
CCTGCAATCA AGGCCATTTC ATTCGTGGGC TCAGTAGGCG TGGGTCAATA CATTTACAAG
ACAGGTACAG ATAATTTAAA GCGTGTTCAA GCCTTCGCTG GTGCAAAAAA CCATTGCGTT
ATCATGCCAG ATGCCAGCAA GCAGCACGTG ATCAACAACC TAGTGGGCGC TTCAGTAGGC
GCCGCCGGTC AACGCTGTAT GGCGATTTCG GTTGCCGTCT TTGTTGGCGC CGCTAAAGAG
TGGATCCCAG AACTTAAAGA AGCCATAGCC AAAGTGCGTC CGGGTCTGTG GAACGATGAA
AATGCCGCTT ACGGCCCTGT AATAAGCCCG GCTGCAAAAC AGCGAGTGCT TAACTTGATT
GCTCAAGGTA AAGCCGAAGG TGCAGAATGT TTACTCGATG GCAGCGACTT CACCGTTGAA
GGCTATGAGT CAGGCAACTG GATTGGCCCA ACCATGTTCG ATAAAGTCAC CACAGACATG
AGCATTTACA AGGAAGAGAT ATTTGGCCCA GTACTGTGCT GTATGGAAGC CGAAAGCTTG
GATGACGCCA TCGAGTTAGT CAATAACAGC CCTTACGGTA ACGGCACCTC AATCTTTACC
GCCAGTGGCG GCGCTGCGCG TAAGTATCAG CATGAAATTG AAGTCGGCCA AGTGGGCATA
AACGTGCCTA TTCCTGTGCC ATTACCTTTC TTCTCATTCA CAGGTTGGAA GGGCAGTTTC
TTCGGCGATC AACATGCCTA CGGTAAGCAA GGCGTGCGTT TCTACACTGA AACTAAGACC
ATCACCTCAC GTTGGTTTGA AACCGATGCG GTCACGGGTC CGAACATGAG CATCAACCTT
AAGTAA
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| Protein sequence | MTTAQITQVK HYINGEFTTG SGTSVIPVTN PANNSVIAHI NSATTEEVEM AISSAKEAFK
TWKEVPVSER ARVMLRYQHL LKEHHDELAT ILAHETGKTF EDAKGDVWRG IEVAEHACNI
ASLMMGETVE NVARNIDTYS YTQPLGVCAG ITPFNFPAMI PLWMFPLSIA CGNTFILKPS
EQDPMTPQRL VELFVEAGAP KGVLQLIHGD KTAVDILLRD PAIKAISFVG SVGVGQYIYK
TGTDNLKRVQ AFAGAKNHCV IMPDASKQHV INNLVGASVG AAGQRCMAIS VAVFVGAAKE
WIPELKEAIA KVRPGLWNDE NAAYGPVISP AAKQRVLNLI AQGKAEGAEC LLDGSDFTVE
GYESGNWIGP TMFDKVTTDM SIYKEEIFGP VLCCMEAESL DDAIELVNNS PYGNGTSIFT
ASGGAARKYQ HEIEVGQVGI NVPIPVPLPF FSFTGWKGSF FGDQHAYGKQ GVRFYTETKT
ITSRWFETDA VTGPNMSINL K
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