| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1918 |
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| Symbol | |
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| ID | 4018407 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2256323 |
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| End bp | 2259130 |
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| Gene Length | 2808 bp |
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| Protein Length | 935 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955940 |
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| Product | ATP-binding region, ATPase-like protein |
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| Protein accession | YP_562924 |
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| Protein GI | 91793273 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG3437] Response regulator containing a CheY-like receiver domain and an HD-GYP domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTGGGGT ATTGCAGTGA TGAAGTCTGC AATAGGCTGT CCATGGCCGT CATAACCTTA
AATGAAGAAT TGGTCGCCCG CGCTGCAGCG CTGAGTACAG AATTTGGCGA CAATATTGCG
CCAGGTTTCG AGGCTTTAGT GTTCAAAGCC AAACATGATC TCGATGACAT TAATCCACTG
ACCTTAATTC GTAAAAATGG CAGCCGCTTC TCGGCTATGG TATCAGTCAC CAGCTTGCGT
GATGCAACCG CTGCAGTCAT TGGTTATTTG TTGATAGGCA CAGATAACAG TGCTCGCAAG
GAAGCCGATG ACAAATTATG GCAGGCGTCC CAATATGCTC GAAGTTTGCT GGAAGCGAGC
CTAGATCCGC TGGTCACAAT TAACCTTAGT GGCAAGATAA CTGACGTCAA TGAGGCCTCC
ATTAAGGCAA CTGGGCTGGA CAGAGAAGCG TTAATAGGCA CGGATTTCTC ACATTATTTC
ACCGACCCCC ATGAAGCCAA TAAAGGCTAT CGAGAAGCCT TTTCCAATGG TTCAGTGACA
GATTATCCGC TGACAATACG CCACCGAAAC GGTCGCCTTA TCGATGTGCT TTATAACGCT
TCGGTTTATC GAGATCACAA AGGGCAAGTG TTGGGATTAT TTGCCGCAGC GCGGGATATT
ACCGCACGAA AGCGTGCAGA TGAGGCGCTG CTCAAAGCAG GGGCGTTGCA AAATGCCATT
TTTAACAGTG CTAATTTCTC CAGTATCGCC ACGGATGCGA AGGGGGTCAT TCAAATTTTT
AACGTCGGCG CCGAACGCAT GCTAGGTTAT GCGGCTATTG ACGTGATAAA TAAATTAACC
CCAGCGGATA TTTCTGAACC CCAAGAAATC GTGATACGCG CTAGAGCCTT GAGTCATGAA
CTTGATACCC CAATTACACC GGGGTTTGAT GCGTTAGTGT TTAAGGCGCG TCGAGGCATT
GAAGACATTT ATGAACTCAC CTATATCCGT AAAGATGGCA GCCGTTTTCC GGCAATAGTG
TCAGTCACCG CACTTCGCGA TGCCCATAAT AATATTATCG GTTATCTCTT AATAGGCACA
GACAACACCG CCCGCAAGCG TGCTGAAGAG GCGCTACTTA AAGCGGGCGC CTTGCAGCGA
GCCATTTTTA ATAGTGCCAA TTTCTCCAGT ATCGCCACGG ATGCCAAAGG CGTTATCCAA
ATATTTAACG TAGGGGCGGA GCGCATGCTA GGTTATACCG CCGCCGAAGT GATGGATAAA
ATCACCCCCG CCGATATATC AGACCCCAAG GAAATGGTGC TGCGAGCTGC ACAGCTCAGT
AAAGAGCTTG AAACCTCTAT AGCACCTGGA TTTGAAGCCT TGGTATTTAA AGCCAGCCGC
GGCATCGAGG ATATTTATCA ACTGACCTAT ATTCGTAAAG ACGGCAGCCG CTTTCCAGCT
GTGGTCTCAG TGACCGCCTT GCGTGATGCT TACAATGTGA TTATCGGTTT CTTACTCATA
GGGACTGACA ATACTGCGCG GATCCAAGTT GAGGAAGAAA GAGAGCAACT CACAGCGACC
TTACAGGACA AAAATGCTGA GCTTGAATCC TCAAAGGCTA TCGCGGAGAA GGCTAACCGA
GCAAAATCGG AGTTTCTATC CAGCATGAGT CATGAGTTGC GCACGCCCCT TAATGCCATT
TTAGGTTTTG CTCAGTTATT GGAAAAAGGT CAACCTACGC TGACCCATAC CCAAGAAGTT
AGAATTCAAC AGATCATCAA GGCAGGATGG TATCTGCTAT CGCTTATCAA TGAAATCCTC
GATCTAGCGG TAATCGAATC GGGCCGGTTG TCATTATCAC GAGAGTCGGT TTTATTAATC
GATGTCATCA ATGAAAGTAA AGCTATGGTA GAGCCACAAG CACTCAAGCG TGAAATTAGG
CTTAACTTTC TGCCTTTTTC CCATGCTTTG CATGCCAATG CCGATCACAC CCGTTTGAAA
CAGGTGTTGA TCAACTTGCT GACCAATGCC ATTAAATATA ATCGACAACA CGGCACTATA
ACTGTGGAAT GCACTGAGGT AAAAGCGATA GATAAACTGC AGGATCGCAT TAGGATAACC
ATAAAAGATA ACGGTTATGG TTTGTCAGAA GCCAATATAA GTCAACTTTT TCAACCATTT
AATAGATTGG GGCAAGAAAG TGGCAGCCAA GAAGGCACTG GCATAGGTCT GGTTGTCACC
AAGCAATTAG TTGAACTCAT GGGCGGGACT ATCGGCGTAA AGAGTCAGGT TGGGGTTGGT
AGCGAATTCT GGATAGAACT GGCGCGGGAT CTCACCCCTA ATTTAGTCAA CAACAGCAAT
GTACCTGCTG AATTGATGCC ACAGATATCT GCAGAGGAAA GTAAATTTAG CTTACTCTAT
GTTGAAGATA ACCCAGCCAA TTTACTGCTA GTCCAGCAAA TAATCTGTGA TTTACCTAAT
GTGACTATGT TAAGTGCCAG AGAAGGCCAT CAAGGCATCG CACTGGCACG GGTTAAGCAG
CCAGATGTCA TTTTGATGGA TATCAACTTA CCAGGGATCA GTGGTATTGA AGCTCTGGTT
ATCCTTAAAA ATGATCCACT GACGGCTCAT ATTCCCGTGT TAGCCATCAG TGCTAATGCT
ATGCCCCGGG ATATTGAGAA AGGATTAGCC TGCGGTTTCC TACGATATCT GACTAAACCC
ATCCGAATTT CTGAGTTTAT CGAAGCGCTG AATTTTGCCC GGGCAAACTC GACGTTCACC
AATGGCAATA ATGAACCCGC AGATAATGAT ATTACCCTTA GCGAATAA
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| Protein sequence | MLGYCSDEVC NRLSMAVITL NEELVARAAA LSTEFGDNIA PGFEALVFKA KHDLDDINPL
TLIRKNGSRF SAMVSVTSLR DATAAVIGYL LIGTDNSARK EADDKLWQAS QYARSLLEAS
LDPLVTINLS GKITDVNEAS IKATGLDREA LIGTDFSHYF TDPHEANKGY REAFSNGSVT
DYPLTIRHRN GRLIDVLYNA SVYRDHKGQV LGLFAAARDI TARKRADEAL LKAGALQNAI
FNSANFSSIA TDAKGVIQIF NVGAERMLGY AAIDVINKLT PADISEPQEI VIRARALSHE
LDTPITPGFD ALVFKARRGI EDIYELTYIR KDGSRFPAIV SVTALRDAHN NIIGYLLIGT
DNTARKRAEE ALLKAGALQR AIFNSANFSS IATDAKGVIQ IFNVGAERML GYTAAEVMDK
ITPADISDPK EMVLRAAQLS KELETSIAPG FEALVFKASR GIEDIYQLTY IRKDGSRFPA
VVSVTALRDA YNVIIGFLLI GTDNTARIQV EEEREQLTAT LQDKNAELES SKAIAEKANR
AKSEFLSSMS HELRTPLNAI LGFAQLLEKG QPTLTHTQEV RIQQIIKAGW YLLSLINEIL
DLAVIESGRL SLSRESVLLI DVINESKAMV EPQALKREIR LNFLPFSHAL HANADHTRLK
QVLINLLTNA IKYNRQHGTI TVECTEVKAI DKLQDRIRIT IKDNGYGLSE ANISQLFQPF
NRLGQESGSQ EGTGIGLVVT KQLVELMGGT IGVKSQVGVG SEFWIELARD LTPNLVNNSN
VPAELMPQIS AEESKFSLLY VEDNPANLLL VQQIICDLPN VTMLSAREGH QGIALARVKQ
PDVILMDINL PGISGIEALV ILKNDPLTAH IPVLAISANA MPRDIEKGLA CGFLRYLTKP
IRISEFIEAL NFARANSTFT NGNNEPADND ITLSE
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