| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1916 |
|---|
| Symbol | |
|---|
| ID | 4018405 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella denitrificans OS217 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007954 |
|---|
| Strand | - |
|---|
| Start bp | 2254525 |
|---|
| End bp | 2255349 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637955938 |
|---|
| Product | cyclic nucleotide-binding |
|---|
| Protein accession | YP_562922 |
|---|
| Protein GI | 91793271 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCTAA TGAAACCAGC TGATGTGAGT CAGCGTCAAT CGACCAGTGT ATTGCACAGC
TCATCGCACA GCCCATCGCA AAATCATTTG CTGGCGGCTC TGCCGCAGGT GGAGCTTGAG
TCATTCAGTG ACCATTTAGA ATTAGTGCCT ATGCCACTTG GAGAGTTTCT CTATGAACCA
GGCTCTGGAT TAGAGTACGT CTATTTCCCG ACAACTTGCA TTGTTTCACT GCATTATGTG
CTTTCATCTG GCGCCACGGC CGAAACGGCT GGGGTCGGCA ATGAAGGTGT CGTGGGTGTG
TCTCTATTTA TGGGGGGCAA TACCACGGCA AGTTCAGCTG TGGTGCAGAC TGCGGGTTAT
GGCTATCGCT TGAATAAGAA AATTTTGATG CGAGAGTTTG ATCGTTCAGG TTTATTGCAG
CGGGTGTTGC TGCGTTATAC CCAAGCTTTA ATGACCCAAA TGTCACAGAC AGCTGTGTGT
AATCGTCATC ATTCTTTAGA GCAGCAATTT TGCCGTTGGT TGTTATTGAC CTTAGATCGC
ATGCCCACCA ATGAGTTAGT CATGACCCAT GAATTAGTGG CCAGCATGTT GGGAGTCTAC
CGCGAAGGCA TAAGTCTTGC TGCTGGTAAA TTGCAACAAG CAGGGGTTAT TAGCTATAGG
CGAGGACACA TTAGTGTATT GGATCGGGCT AAACTTGAAC TGAAGAGCTG CGAATGTTAC
CAAGTCGTCA AAACTGAGTT AGATAGATTA TTGTCTGATG GTTTATTAGC AGATGCAAAA
TTTATCAAGA CTAAGACCGA TACCCAAACG AGCAAAACCC AGTAG
|
|---|
| Protein sequence | MTLMKPADVS QRQSTSVLHS SSHSPSQNHL LAALPQVELE SFSDHLELVP MPLGEFLYEP
GSGLEYVYFP TTCIVSLHYV LSSGATAETA GVGNEGVVGV SLFMGGNTTA SSAVVQTAGY
GYRLNKKILM REFDRSGLLQ RVLLRYTQAL MTQMSQTAVC NRHHSLEQQF CRWLLLTLDR
MPTNELVMTH ELVASMLGVY REGISLAAGK LQQAGVISYR RGHISVLDRA KLELKSCECY
QVVKTELDRL LSDGLLADAK FIKTKTDTQT SKTQ
|
|---|
| |