Gene Sden_1911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1911 
Symbol 
ID4018400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2244946 
End bp2246997 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content46% 
IMG OID637955933 
Productpeptidase S9, prolyl oligopeptidase active site region 
Protein accessionYP_562917 
Protein GI91793266 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000149858 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CCTCTCTTTT ACTTGCCTTG ATGACTGCAG GATTGTGCAG TTCAGTTCAG 
GCAGCCGCGC CGACGGCGTT CAATGTTCAG CAATTGGTTA ACCTTAATAA ACTTCATTCT
GCTGCTGTGT CTAATGATGG CACTAAGCTG GTTTACGGCG TTAAAATTAA AGATGCCAAC
AACGAAGCAA GCTCTGATCT TTATTTGCTG GATTTAAGCG ATAAAAATGC TAAGCCTATG
CAGCTAACCA GCGCTGCTGG CACTGAGTCT GATGTGACCT TTGCCCCCGA TGGAAAGTCT
ATCTATTTCA TGGCGAGCCG TTCAGGTTCA AGCCAAATAT ATAAGTTAGC CCTTAACGGC
GGCGAAGCCA TCCAAGTCAC AGATTTACCT TTAGACGTCA ACGGCTACAA GTTGTCACAA
GATGGCAAGC AAGTGGTGAT GACCCTGCGG GTTTTCCCTG AGTGTAAAGA CCTTCAATGC
TCTAAAGATA AGTTTCAAGC CGAGAAAGAT AAAAAAACTA CCGGCCGTGA ATACAAGCAG
TTAATGGTAC GCCATTGGGA TACTTGGGAA GATCACGCTC GTAATCATTT ATTTGTGGCG
CCATTAAACG GCAATAAGAT CACCACAGCC ATAAATGTAA CCCAAGGCAG GGACACAGAA
ACGCCGCCTA AGCCATTCTC TGGCATGGAA GAAGTGACCT TCACCCCTGA TGGACAGCAC
ATTGTCTATA GCGCTAAAGC GCCAAGTACA GATCAAGCTT GGACCACCAA TTATGATTTA
TGGCAAGTGA GTGTGAAGGG CGGTGAAACA ACGAATCTAA CCCCAAGTAA CGCTGCTTGG
GATGCACAAC CTGTCTTCTC TGCCGATGGC CGTTATTTAG CCTATCTTGC GATGAGCAAA
CCGGGTTTTG AAGCAGACCG CTATAAAATC ATGCTTCGTG ACAATGCCAC TGGTGATGAA
CGAGAAGTGG CGCCTTTATG GGACAGAAGT CCGAGTTCGA TTAACTTCAG CAGTGATGGT
CGTACCTTAT ACGTCACGGC TCAAGATGTA GGCCAAGTCT CCATATTTGA AGTTAACACT
CAATTTGGTG ATGTGCGTCC TATCTACAAC CAGGGCAGTA GCCACCTAGT TGCGGTGACA
AGCAAAGGCA TTATTTTCGA TAACACTAGC CTGACAGAGC CTGGCGATTT ATACAAAATC
AACTTAGAAG GTGAGCACTT AACTCGGCTC ACCGAAGTGA ACAAAGACAA GCTGGCTAAC
ATCAAGTTTG GTGAATACCA GCAATTCAAC TTTAAGGGTT GGAACGACGA GACTGTACAC
GGTTATTGGA TTAAACCCAC GAACTTCGAA GAAGGTAAAC AATACCCCAT TGCTTACTTA
GTTCATGGTG GCCCGCAAGG ATCATTTGGT AACAGCTTTA GCGGTCGCTG GAACGCACAG
CTATGGGCGG GTGCGGGCTA TGGCGTAGTG ATGGTGGATT TTCACGGTTC TACCGGTTAT
GGGCAAGCAT TCACTGACTC CATTTCTAAA GATTGGGGCG GTAAGCCATT AGAAGATTTA
CAAAAAGGCT TAGCGGCTGT GGCTGAGCAA CAACCTTGGC TTGATGCAAC CAATGCTTGT
GCCTTAGGTG GCTCTTATGG CGGCTACATG ATGAACTGGA TCCAAGGCCA TTGGAATACA
GGCTTTAAGT GCCTAGTAAA CCATGCTGGT CTGTTTGATA TGCGTTCCAT GTACCATGTG
ACTGAAGAGT TATGGTTCCC TGAATATGAT TTCGGTGGAC CTTACTCAGA TAACAAGGCA
TTGTACGAGA AGTTTAATCC GGTGAACTAT GTTGAAAACT GGAAAACACC TATGCTGATC
ATTCATGGCG AGAAAGACTT CCGTGTCCCT TATGGCCAAG GCTTAGCCGC GTTCAGTTAT
ATGCAACGTA AAGGTATTCC TTCAGAGTTA TTGATGTTTC CGGATGAGAA TCACTGGATT
TTAAATCAAG ATAACCTGCA GCAATGGTAT AACAATGTAC TAGGCTGGAT GGACCGCTGG
ACTGCTAAGT AA
 
Protein sequence
MKKTSLLLAL MTAGLCSSVQ AAAPTAFNVQ QLVNLNKLHS AAVSNDGTKL VYGVKIKDAN 
NEASSDLYLL DLSDKNAKPM QLTSAAGTES DVTFAPDGKS IYFMASRSGS SQIYKLALNG
GEAIQVTDLP LDVNGYKLSQ DGKQVVMTLR VFPECKDLQC SKDKFQAEKD KKTTGREYKQ
LMVRHWDTWE DHARNHLFVA PLNGNKITTA INVTQGRDTE TPPKPFSGME EVTFTPDGQH
IVYSAKAPST DQAWTTNYDL WQVSVKGGET TNLTPSNAAW DAQPVFSADG RYLAYLAMSK
PGFEADRYKI MLRDNATGDE REVAPLWDRS PSSINFSSDG RTLYVTAQDV GQVSIFEVNT
QFGDVRPIYN QGSSHLVAVT SKGIIFDNTS LTEPGDLYKI NLEGEHLTRL TEVNKDKLAN
IKFGEYQQFN FKGWNDETVH GYWIKPTNFE EGKQYPIAYL VHGGPQGSFG NSFSGRWNAQ
LWAGAGYGVV MVDFHGSTGY GQAFTDSISK DWGGKPLEDL QKGLAAVAEQ QPWLDATNAC
ALGGSYGGYM MNWIQGHWNT GFKCLVNHAG LFDMRSMYHV TEELWFPEYD FGGPYSDNKA
LYEKFNPVNY VENWKTPMLI IHGEKDFRVP YGQGLAAFSY MQRKGIPSEL LMFPDENHWI
LNQDNLQQWY NNVLGWMDRW TAK