Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1900 |
Symbol | |
ID | 4018388 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2230843 |
End bp | 2232858 |
Gene Length | 2016 bp |
Protein Length | 671 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637955921 |
Product | NADH:flavin oxidoreductase/NADH oxidase |
Protein accession | YP_562906 |
Protein GI | 91793255 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases [COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0000127564 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGTTTC CACATTTATT AGAACCCTTA GATCTAGGCT TTACTCAGTT GAAAAACCGC GTGTTGATGG GCTCCATGCA CACGGGCTTA GAAGAAGAAA AGGGCGGCTT TGAGAAACTG GCAGCATTTT ACAAAGAGCG TGCCCTTGGC GGTGTTGGCC TAATTGTTAC CGGTGGGATC TCGCCTAATT TTCGTGGCCG CTTAGCCCCC CATGCCAGCC AATTGAGTTT TTCTTGGCAA GTTAAAAAGC ACAAAATTGT CACTGATGCG GTGCATGATG GCGGCGGAAA AATCTGTATG CAGATTTTGC ATGCCGGCCG CTATGGCTAT CACCCTTTTA GCCAAGCACC GAGCAAGATT AAATCCCCTA TCACGCCTTT TACGCCATCG GCCATGTCTG CCCGCCAAGT GCGAGGCACA ATCAAAGATT ACGCCAGCAG TGCGGCTTTA GCGAAAAAAG CCGGTTATGA CGGTGTCGAA GTCATGGGCT CTGAAGGCTA CCTTATCAAT CAATTTGTTA GCTCGCGCAC CAACAAACGT GATGATGAGT GGGGCGGTGA TTTCGCTAAA CGTGCCCGTT TCCCTGTCGA AATTGTTAAT GCCATTCGAG AGAAAGTCGG CCAAGATTTT ATCATCATTT TCCGTCTGTC TATGCTAGAT CTTGTTGATA ACGGTTCTAC TTGGGATGAA GTGGTTCAGC TCGCTAAATG GCTCGAGGAG TCAGGTGTTA GCATAATCAA TACCGGTATT GGCTGGCATG AAGCCAGAGT ACCCACAATT TCTACCAGTG TGCCAAGAGG CGCTTTTTCT TGGGTGACTG AAAAGCTTAA AAGCGAAGTT AACTTGCCAC TGATTGCCAC AAACCGCATC AATACCCCAG AAATTGGTGA ATCCATCATC GCCTCTGGGC AGGCGGACAT GGTCTCTATG GCTCGTCCTT TCTTGGCCGA TCCAGACTTT GTTAATAAAG CGGCAGCAAA TCAGAGTGAG ATGATAAACA CCTGTATCGG TTGCAATCAG GCGTGTTTAG ATCACACCTT TGCTCTCAAG CGCGCTACTT GCTTGGTTAA TCCAAGGGCT TGTTACGAGA CAGAAATAAA CTTCCTGCCA ACCAAAAATA AGAAGCGTAT CGCTGTTATG GGCGCAGGCC CTGCTGGCAT GGCCTTCTCT GTGTATGCCG CCACTCGCGG CCACGAAGTG GTATTGTTTG AAGCAAAATC TGAAGTCGGC GGCCAGTTTA ACTTGGCAAG GAAAATTCCA GGTAAAGAAG AGTTTAATGA AACGATCCGC TACTTTATCA ATCAATTGGC CCTACATAAA GTAGAGTTAA GGCTCAATAC TCGTTTGGAT GCTAGCGTAT TGGCTACAGA AAAGTTTGAT GAAGTGGTGA TTTCTTCTGG TGTAGTGCCA AGAGCCATTA ATTTGCCTGG TTTTGATAGC CCTAAAGTCG TTGATTATCA GCAAGTCTTA AGCGGTCAGG TTGAGATTGG ACAAAAGGTT GCATTGATTG GCGCTGGCGG CATTGGTTTT GATATGGCGC ACTTCTTGTG TGAGAAAGAG TCGAGCACCT TGCAACCAGA CAAATGGCTT AAGCAGTGGG GCATAGATAA AAGCTATGAG CATGCGGGCG GTTTGACTGA AGAAGCCGAG CATCACCCAG GTCGTGAAGT TTACTTATTG CAGCGCAAAA CCAGTAAAAT AGGTAAAGGC CTTGGGAAAA CTACCGGCTG GATCCACAGG AGCGTGCTAA AACAGCATCA AGTGAAGACT ATGACTGGGG TCAGCTATGA GAAATTTGAT GAACAAGGAC TGCACATTAC TATAGATGAC AAGCCACAAA TACTGGCGGT TGATAATGTC GTTTTGTGTG CAGGCCAAGA GTCTAACCGC ACCTTGTTGG AGGAAATGAA GGCAACGGGA TTACCTGTGC ACTTGATTGG CGGCGTGGAT GTAGCAGCAG AACTTGATGC TAAGCGGGCC ATAAGACAGG GCGCCGAGCT TGCCATGGCA CTGTAA
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Protein sequence | MSFPHLLEPL DLGFTQLKNR VLMGSMHTGL EEEKGGFEKL AAFYKERALG GVGLIVTGGI SPNFRGRLAP HASQLSFSWQ VKKHKIVTDA VHDGGGKICM QILHAGRYGY HPFSQAPSKI KSPITPFTPS AMSARQVRGT IKDYASSAAL AKKAGYDGVE VMGSEGYLIN QFVSSRTNKR DDEWGGDFAK RARFPVEIVN AIREKVGQDF IIIFRLSMLD LVDNGSTWDE VVQLAKWLEE SGVSIINTGI GWHEARVPTI STSVPRGAFS WVTEKLKSEV NLPLIATNRI NTPEIGESII ASGQADMVSM ARPFLADPDF VNKAAANQSE MINTCIGCNQ ACLDHTFALK RATCLVNPRA CYETEINFLP TKNKKRIAVM GAGPAGMAFS VYAATRGHEV VLFEAKSEVG GQFNLARKIP GKEEFNETIR YFINQLALHK VELRLNTRLD ASVLATEKFD EVVISSGVVP RAINLPGFDS PKVVDYQQVL SGQVEIGQKV ALIGAGGIGF DMAHFLCEKE SSTLQPDKWL KQWGIDKSYE HAGGLTEEAE HHPGREVYLL QRKTSKIGKG LGKTTGWIHR SVLKQHQVKT MTGVSYEKFD EQGLHITIDD KPQILAVDNV VLCAGQESNR TLLEEMKATG LPVHLIGGVD VAAELDAKRA IRQGAELAMA L
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