| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1893 |
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| Symbol | |
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| ID | 4018381 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2222923 |
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| End bp | 2223879 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637955914 |
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| Product | Alpha-L-glutamate ligase-related protein |
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| Protein accession | YP_562899 |
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| Protein GI | 91793248 |
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| COG category | [H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) |
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| TIGRFAM ID | [TIGR02291] alpha-L-glutamate ligase-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0204076 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTACG CTTGGCCTTG GGAATTACGC CGAAGCGGCG TGTTGAATAT GAACAAGCGC
AATATCGATT ATATTGGTCG ATACAATAAG CGTAAGTTTT ACAAGCGTGT GGATGATAAA
TTAATCACTA AACAATTAGC CCTGGCAAAC GGCATCGCCG TGCCAGATTT AATCGGAGTG
GTCCATGAGC AGCATAAAAT TCAGGAGATC CCTGAGCTGG TAAAAAATCG TAGTGGTTTT
GTGATAAAGC CGGCGAAGGG TTCTGGCGGT AAGGGCATTT TGGTCATCAC CCATGTTGAA
CATGGCTGTT ACTACAAGCC TAACGGCCAT GAAGTGACCC CCAATGAAGT CTACCGCCAT
GTGTCAAACA TCTTAAGTGG CTTATTCTCA CTGGGGGGCA AGCCTGATGT GGCCTTAGTG
GAAGGGCTGA TTGAATTTGA TCCTGTATTT GAAGGATTCA GTTACGAAGG TGTACCTGAC
ATTCGGCTTA TCGTGTTCAA AGGCTTCCCT GTGATGGGCA TGTTGCGTCT TTCTACCGCA
GCCTCTGATG GCAAGGCTAA CTTGCATCAA GGCGCCGTCG GTGTTGGGCT TGATGTGGCG
ACAGGAAAGA GCTTGCACGC AGTGCAATTT GATAAACCTG TGACTAAGCA CCCCGATACC
CACTTCCCCT TGTCGAACAT TCAGGTTCCT CATTGGGAAA CCTTGCTACA CACAGCCTCG
AGCGCCTATG AAATGTGTGA GTTGGGGTAT TTAGGCACTG ACATGGTACT GGATAAAAAC
AAAGGTCCTT TGTTACTCGA ACTTAATGCC CGCCCAGGTT TGACAATTCA AATCGCGAAC
GGTAAAGGTA TTTTGCCTAG GCTTAAACAC GTAGAGGCCA TGAAAGGCCC TAGCATGTCA
GTGGAAGAAC GTGTCGCGTA TGCAAAAATA CATTTTAGCA GTAGCGCTAT TTTTTAA
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| Protein sequence | MNYAWPWELR RSGVLNMNKR NIDYIGRYNK RKFYKRVDDK LITKQLALAN GIAVPDLIGV
VHEQHKIQEI PELVKNRSGF VIKPAKGSGG KGILVITHVE HGCYYKPNGH EVTPNEVYRH
VSNILSGLFS LGGKPDVALV EGLIEFDPVF EGFSYEGVPD IRLIVFKGFP VMGMLRLSTA
ASDGKANLHQ GAVGVGLDVA TGKSLHAVQF DKPVTKHPDT HFPLSNIQVP HWETLLHTAS
SAYEMCELGY LGTDMVLDKN KGPLLLELNA RPGLTIQIAN GKGILPRLKH VEAMKGPSMS
VEERVAYAKI HFSSSAIF
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