| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1892 |
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| Symbol | |
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| ID | 4018380 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2221415 |
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| End bp | 2222923 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637955913 |
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| Product | gonadoliberin III-related protein |
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| Protein accession | YP_562898 |
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| Protein GI | 91793247 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00034155 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATTCTC GTCAACCTTT TTACATTTTT GTGGCATTAC TCTTCATCGT TGGCATCGCC
GCCAGTGTAT ACCGTGGCAT TGAACATAAG GTGCCCTTCG TACCTGGTGA GCAAGTGCAA
AGCTGGTCTG TGGATGCCAA AGTTAGTTTT TCAGGACGTG GCAAGCCCGC TGAAGTGTCC
TTCTCTTTAC CTCAAGATCC TGCATTTGAT GTATTAGTTG AAAACGCTTC ATCGCCAGGT
TACGGCTTAA ACATTACTGA CAGCACGGAA AACCGCCGCG CAGTTTGGTC CATTCGTGAA
GCCACAGGTC CTCAAGCCCT GTATTATCGC GTTACACTCG TCCCCACGGG TAAACTTGAT
ATTATCGAAG AGCAAGAGCC TGCGACGCCT GATGAATATA TCTGGCCTGC CACCGAAAAA
CTTGCTGCAG AGCAAATTAT CGAAGACGTT TGGGGCCGTA GTGCCACTAA TCTGTCTTTC
GCTCAACAAC TAATGGGGCT TATCAACGAC GATAACCAAA GCCAGAACAT GTCCTTATTA
CTGGCCACCA ATAGCAGCAC TAAACTTTTC TTGCACATGT TGCACAGTAA AGGTGTGCCC
GCAAAACAAG TCAGTGGCTT AGTCCTTGAA GATCAACGTC GTCGCCAACA ACTCAGCGAC
TATGTGCAAG TCTACAACGA AGGCCAATGG GAATTATTTG ATGTCAACGG CAACAAACAA
GGCCGTGGTC AGAATCTTAT TCTTTGGGAG TTTGGCGGCA ATTCAGTATT AGATGTCACA
GGGGCATCTA ATTCACAAGT CAACTTCTCC ATGTTGCAAG AGACACGCTC GGCGTTAGCC
ACTTCAATTG ACATGTTGTC CAATGATGGC GCACTGGATT TCTCGCTTTA TCAACTGCCA
CTAGAAGAAC AAAGCACCTT TAAGGGCATT CTTTTGATCC CTATTGGTGT GTTGGTCGTA
GTATTTTTGC GCGTCATCGT GGGGATTAAA ACCTCTGGCA CCTTTATGCC GGTATTGATT
GCTTTAGCCT TTATTCAAAC CACTTTACTC ACAGGCTTAA TCGGCTTTTT ATTGATTGTG
GCGTTTGGCT TAATGATCCG CTCCTATCTG TCCACCTTGA ACTTACTGCT CATCTCGCGA
ATATCCGCGG TGATTATCGT GGTTATTTTC ATTATTGGCT TGTTCACCTT GATTTCATAC
AAGCTAGGAC TCAGTGAAGG CTTAACCATT ACCTTCTTCC CTATGATCAT TTTGGCGTGG
ACTATCGAGC GTATGTCAAT CTTGTGGGAA GAAGAAGGCC CTAAGAAAGT CTTTACCTCT
GGCGGTGGCA GCTTATTTGT GGCGACGTTA GCTTATTTGG CCATGGACAA TATCTGGATC
CAGCACTGGG TGTATAACTT CCTTGGGATC CATTTAGTCA TCTTGGCCTT AGTCCTCGTC
ATGGGCCAAT ACACAGGCTA CCGTTTGACT GAGCTTAAGC GCTTCAAGCC TTTAGCTGGA
GACAAATAA
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| Protein sequence | MHSRQPFYIF VALLFIVGIA ASVYRGIEHK VPFVPGEQVQ SWSVDAKVSF SGRGKPAEVS
FSLPQDPAFD VLVENASSPG YGLNITDSTE NRRAVWSIRE ATGPQALYYR VTLVPTGKLD
IIEEQEPATP DEYIWPATEK LAAEQIIEDV WGRSATNLSF AQQLMGLIND DNQSQNMSLL
LATNSSTKLF LHMLHSKGVP AKQVSGLVLE DQRRRQQLSD YVQVYNEGQW ELFDVNGNKQ
GRGQNLILWE FGGNSVLDVT GASNSQVNFS MLQETRSALA TSIDMLSNDG ALDFSLYQLP
LEEQSTFKGI LLIPIGVLVV VFLRVIVGIK TSGTFMPVLI ALAFIQTTLL TGLIGFLLIV
AFGLMIRSYL STLNLLLISR ISAVIIVVIF IIGLFTLISY KLGLSEGLTI TFFPMIILAW
TIERMSILWE EEGPKKVFTS GGGSLFVATL AYLAMDNIWI QHWVYNFLGI HLVILALVLV
MGQYTGYRLT ELKRFKPLAG DK
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