| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1887 |
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| Symbol | aspS |
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| ID | 4018375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2213833 |
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| End bp | 2215614 |
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| Gene Length | 1782 bp |
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| Protein Length | 593 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637955908 |
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| Product | aspartyl-tRNA synthetase |
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| Protein accession | YP_562893 |
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| Protein GI | 91793242 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0173] Aspartyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00122802 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAGTC ATTATTGTGG AGACATCAAT AGGTCTCATC TGGGTCAAGA AGTTACCTTA
GTGGGTTGGG TTAACCGCAG CCGTGACTTA GGCGGTGTGG TTTTCTTAGA TTTACGCGAC
AGAGAAGGCT TAGTGCAAGT CGTCTATGAT CCAGATCTAA AAGATGTCTT CGATGTGGCC
AGCAGCTTGC GCGGTGAGTT TTGTGTTCAA GTTACAGGTT TAGTTCGCGC CCGTCCCGAT
AGCCAAATCA ACAGTCAAAT GAAAACCGGT GAAATTGAAG TGTTAGGCAA AGGCTTAACC
ATAATCAATG CGTCAGCGCC ATTGCCATTA AGCATGGACA ATCACCAGAA TAACAGCGAA
GAGCAACGCC TTAAGTACCG TTATTTAGAC TTACGTCGCC CAGAAATGGC CGAACGCTTA
ATTTTCCGCG CTAAAGTCAC CAGTGCAGTG CGTCGTTTCC TCGACAGTAA CGGCTTCTTG
GACATAGAAA CCCCGATTTT AACTAAGGCA ACCCCAGAGG GGGCCCGCGA CTATTTAGTG
CCGAGCCGCA CCTACAAGGG TCAGTTCTTT GCCTTACCTC AGTCGCCACA GCTGTTCAAA
CAGTTGTTAA TGATGTCAGG CTTTGATCGT TATTACCAAA TCGTTAAGTG CTTCCGTGAT
GAAGACTTAC GTGCCGACCG TCAACCAGAA TTTACCCAAA TCGATATCGA AACCTCGTTT
ATGACCTCTG AAGAAGTGAT GGTCAAAACC GAAGAAATGA TGCGTGGTTT GTTCCTTGAG
CTATTAAATG TGGACCTCGG CGAGTTCCCT CGCATGACCT ATAACGAAGC CATGCGGCGT
TTTGGTTCAG ACAAGCCAGA TTTACGTAAC CCACTTGAGT TAGTCGATGT GGCTGACTTA
CTAAAAGAGG TGGAGTTTGC GGTATTCAAT GGCCCAGCTA ACGATGAAGA AGGCCGGGTT
GCCGCGCTGC GCATTCCAAA TGGGGCCACG CTTTCACGTA AGCAAATTGA TGATTACACT
AAGTTTGTTG GCATTTATGG CGCCAAAGGC CTAGCATGGA TGAAAATAAA CGATTTAGCC
GCAGGCATGG AAGGCATTCA ATCCCCTGTG CTTAAGTTCT TAACTGAATC AATCGTTAAT
GACATCATCA GCCGCACTGG CGCACAAACT GGCGACATCA TCTTATTTGG TGCCGATAAA
GCCAACGTTG TTGCCGAAGC CATGGGCGCA TTGCGCTTAA AAGCCGGTGA AGACTTTGAA
TTACTCGAAG GTCAGTGGCG TCCGCTTTGG GTCATCGACT TCCCCATGTT TGAAAAAATT
AACGGCGGTT TCCACGCGGT TCACCATCCG TTTACTGCCC CTCGCGGCGT GACGGCTGCA
GAACTTGAAG CCAACCCAGC TAACCGTGTA TCCGATGCCT ATGACATGGT ATTAAACGGC
TGCGAATTAG GCGGCGGTTC GGTGCGTATT CATAACGCTG AAATGCAAAG TGCCGTGTTC
CGTATTCTGG GCATCGAAGA AGAGGAAGCC AAAGAGAAGT TTGGTTTCTT ATTGGAAGCC
CTACGTTATG GCACGCCGCC ACACGCAGGT TTAGCCTTTG GTCTTGATCG CATCATAATG
CTAATGACGG GCGCCACCTC AATCCGCGAT GTGATGGCCT TCCCTAAGAC CACCACAGCT
GCTTGTCCAT TAACTAATGC ACCAGGTTTT GCTAACCCAG CTCAATTAAC TGAGTTAGGT
ATCAAGGTGG TTGAAAAGGT GAAAGTTGCT GACGGCGAAT AA
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| Protein sequence | MRSHYCGDIN RSHLGQEVTL VGWVNRSRDL GGVVFLDLRD REGLVQVVYD PDLKDVFDVA
SSLRGEFCVQ VTGLVRARPD SQINSQMKTG EIEVLGKGLT IINASAPLPL SMDNHQNNSE
EQRLKYRYLD LRRPEMAERL IFRAKVTSAV RRFLDSNGFL DIETPILTKA TPEGARDYLV
PSRTYKGQFF ALPQSPQLFK QLLMMSGFDR YYQIVKCFRD EDLRADRQPE FTQIDIETSF
MTSEEVMVKT EEMMRGLFLE LLNVDLGEFP RMTYNEAMRR FGSDKPDLRN PLELVDVADL
LKEVEFAVFN GPANDEEGRV AALRIPNGAT LSRKQIDDYT KFVGIYGAKG LAWMKINDLA
AGMEGIQSPV LKFLTESIVN DIISRTGAQT GDIILFGADK ANVVAEAMGA LRLKAGEDFE
LLEGQWRPLW VIDFPMFEKI NGGFHAVHHP FTAPRGVTAA ELEANPANRV SDAYDMVLNG
CELGGGSVRI HNAEMQSAVF RILGIEEEEA KEKFGFLLEA LRYGTPPHAG LAFGLDRIIM
LMTGATSIRD VMAFPKTTTA ACPLTNAPGF ANPAQLTELG IKVVEKVKVA DGE
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