| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1886 |
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| Symbol | |
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| ID | 4018374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | - |
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| Start bp | 2212992 |
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| End bp | 2213738 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637955907 |
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| Product | hypothetical protein |
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| Protein accession | YP_562892 |
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| Protein GI | 91793241 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGCAGGTC ATAGTAAATG GGCCAATATT AGGCACCGCA AAGCAGCGCA AGACGCTAAG
CGTGGCAAAC TTTTCACCAA ATTTATTCGC GAATTAACGG TCGCAGCCCG TGAAGGCGGC
TCAGATCCCG ACGCCAATCC TAGGCTTCGT GCCGCAATCG ATAAATCCTT GTCCAACAAT
ATGACCCGCG ACACGGTTGA GCGCGCCATT AAACGCGGCG CCGGCGAGCT GGACGGTCAG
CAGTTAGAAA CCATTATTTA CGAAGGCTAT GGCCCAGGTG GCACGGCTGT GATGGTGGAA
ACCATGACGG ATAACCGTAA CCGCACTGTA TCGGGTGTAC GCAATGCCTT TAATAAATCC
GGCGGTAATT TAGGCACCGA CGGCTCGGTG GCTTATTTGT TCACAAAATC TGGCATCATC
TCTTTTGATA ACAGCAATGA TGAAGACGTC TTGATGGAGC AAGCCTTAGA GGCGGGCGCC
GAAGATGTGA TAAGCCATGA TGATGGCTCA GTGGATGTGC TCACAAGCCC AGACACTTTC
GGCAAGGTGA AAGATGCATT GGACAGTGCA GGCTTAAATG CCCTTAATGC TGAAGTCACC
ATGCTGGCCT CACTTAAAGC CGAACTTGAC CTTGAAACCG CAGAAAAATT CTTGCGTCTC
ATCGACACCT TAGAAGATCA TGATGATGTG CAAGAGGTGT ATCATAACGC CGAGATTTCC
GATGATGTTA TGGCGCAGCT CGATTAA
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| Protein sequence | MAGHSKWANI RHRKAAQDAK RGKLFTKFIR ELTVAAREGG SDPDANPRLR AAIDKSLSNN
MTRDTVERAI KRGAGELDGQ QLETIIYEGY GPGGTAVMVE TMTDNRNRTV SGVRNAFNKS
GGNLGTDGSV AYLFTKSGII SFDNSNDEDV LMEQALEAGA EDVISHDDGS VDVLTSPDTF
GKVKDALDSA GLNALNAEVT MLASLKAELD LETAEKFLRL IDTLEDHDDV QEVYHNAEIS
DDVMAQLD
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