Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sden_1884 |
Symbol | ruvA |
ID | 4018372 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella denitrificans OS217 |
Kingdom | Bacteria |
Replicon accession | NC_007954 |
Strand | - |
Start bp | 2211863 |
End bp | 2212474 |
Gene Length | 612 bp |
Protein Length | 203 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637955905 |
Product | Holliday junction DNA helicase RuvA |
Protein accession | YP_562890 |
Protein GI | 91793239 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0632] Holliday junction resolvasome, DNA-binding subunit |
TIGRFAM ID | [TIGR00084] Holliday junction DNA helicase, RuvA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.425804 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATAGGTA GATTGAACGG CATTTTAGTA GAAAAGCACG CCCCAGAAAT TGTCTTGGAT GTGGGCGGTG TCGGTTATGA GTTGCAAGTG CCAATGACCA GCTTTTATGA ACTGCCAGAA CTTGAGCAGA GTGCCACCCT GTACACCCAC TTTGTGGTCA GAGAAGATGC GCAGCTGCTT TATGGTTTTA TCACTAAACA AGAGCGCGCG TTGTTTCGCT TATTGATAAA AACCAATGGT GTGGGCCCAA AGCTTGCGTT AACTATTTTA TCTGGCATGA CCGCAGGGGA GTTTGTCTCT TGCGTGGAGC GCGATGACAT CGTCACCTTG GTTAAATTAC CCGGTGTTGG CAAGAAAACC GCCGAGCGTT TAGTAGTAGA AATGCGCGAT AAACTAAAAA GTTTGCTTGA AGCCTCAGTG GGCAATGAGC GCGAGTTTAT GCTGCAAACC AATTACACAG CGCCTGCGGC AAACGCTGAA GAAGATGCCA TTTCCGCTTT AGTCTCACTA GGTTATAAGC CGCCTCAAGC AAGTCGCGCC GTCTCTAAGG CGTATAAAGA AGGCATGGAC ACGGAAACCT TGATTAAGCT TGCGCTTAAA TCCATGTTAT AG
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Protein sequence | MIGRLNGILV EKHAPEIVLD VGGVGYELQV PMTSFYELPE LEQSATLYTH FVVREDAQLL YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTAGEFVS CVERDDIVTL VKLPGVGKKT AERLVVEMRD KLKSLLEASV GNEREFMLQT NYTAPAANAE EDAISALVSL GYKPPQASRA VSKAYKEGMD TETLIKLALK SML
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