Gene Sden_1884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1884 
SymbolruvA 
ID4018372 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand
Start bp2211863 
End bp2212474 
Gene Length612 bp 
Protein Length203 aa 
Translation table11 
GC content47% 
IMG OID637955905 
ProductHolliday junction DNA helicase RuvA 
Protein accessionYP_562890 
Protein GI91793239 
COG category[L] Replication, recombination and repair 
COG ID[COG0632] Holliday junction resolvasome, DNA-binding subunit 
TIGRFAM ID[TIGR00084] Holliday junction DNA helicase, RuvA subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.425804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATAGGTA GATTGAACGG CATTTTAGTA GAAAAGCACG CCCCAGAAAT TGTCTTGGAT 
GTGGGCGGTG TCGGTTATGA GTTGCAAGTG CCAATGACCA GCTTTTATGA ACTGCCAGAA
CTTGAGCAGA GTGCCACCCT GTACACCCAC TTTGTGGTCA GAGAAGATGC GCAGCTGCTT
TATGGTTTTA TCACTAAACA AGAGCGCGCG TTGTTTCGCT TATTGATAAA AACCAATGGT
GTGGGCCCAA AGCTTGCGTT AACTATTTTA TCTGGCATGA CCGCAGGGGA GTTTGTCTCT
TGCGTGGAGC GCGATGACAT CGTCACCTTG GTTAAATTAC CCGGTGTTGG CAAGAAAACC
GCCGAGCGTT TAGTAGTAGA AATGCGCGAT AAACTAAAAA GTTTGCTTGA AGCCTCAGTG
GGCAATGAGC GCGAGTTTAT GCTGCAAACC AATTACACAG CGCCTGCGGC AAACGCTGAA
GAAGATGCCA TTTCCGCTTT AGTCTCACTA GGTTATAAGC CGCCTCAAGC AAGTCGCGCC
GTCTCTAAGG CGTATAAAGA AGGCATGGAC ACGGAAACCT TGATTAAGCT TGCGCTTAAA
TCCATGTTAT AG
 
Protein sequence
MIGRLNGILV EKHAPEIVLD VGGVGYELQV PMTSFYELPE LEQSATLYTH FVVREDAQLL 
YGFITKQERA LFRLLIKTNG VGPKLALTIL SGMTAGEFVS CVERDDIVTL VKLPGVGKKT
AERLVVEMRD KLKSLLEASV GNEREFMLQT NYTAPAANAE EDAISALVSL GYKPPQASRA
VSKAYKEGMD TETLIKLALK SML