Gene Sden_1869 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSden_1869 
Symbol 
ID4018357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella denitrificans OS217 
KingdomBacteria 
Replicon accessionNC_007954 
Strand+ 
Start bp2197307 
End bp2197939 
Gene Length633 bp 
Protein Length210 aa 
Translation table11 
GC content44% 
IMG OID637955890 
Productendonuclease III 
Protein accessionYP_562875 
Protein GI91793224 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAAAG AAAAGCGCAT TCAAATTCTC ACTCGCCTTA GGGATAATAA CCCTAAGCCT 
GAGACCGAAC TTAATTTTTC AAGCCCTTTT GAGCTGTTAG TGGCGGTGAC ATTATCGGCC 
CAGGCTACGG ATGTGAGTGT CAATAAAGCC ACTGACAAGC TATTTCCCGT CGCCAATACG 
CCCCAGGCTA TTTTTGAACT GGGCGTCGAC GGCTTAAAAA GTTACATAAA AACCATAGGT 
TTATATAACA ATAAAGCCAT CAATGTGATT AAAGCCTGTG AAATTTTAAT CAATCAATAT 
CAAGGCGAAG TCCCTGAAAA CCGTGAAGCG CTGGAGTCTT TACCCGGTGT AGGCCGTAAA 
ACCGCCAATG TAGTGCTCAA TACGGCCTTT GGTTGGCCCA CCATAGCGGT GGATACCCAT 
ATCGACCGTG TTTCTAATCG TACTAAGTTT GCTATGGGCA AAAACGTGGT AGAAGTTGAG 
CAAAAGCTAC TTAAAGTAGT ACCTGCTGAA TTTAAAGTAG ACGTTCACCA CTGGCTCATT 
TTACACGGCC GCTACACCTG TATTGCCCGT AAACCACGTT GTGGTTCGTG TTTAATTGAA 
GACTTGTGCG AGTTTAAAGA CAAGACTGAG TAG
 
Protein sequence
MNKEKRIQIL TRLRDNNPKP ETELNFSSPF ELLVAVTLSA QATDVSVNKA TDKLFPVANT 
PQAIFELGVD GLKSYIKTIG LYNNKAINVI KACEILINQY QGEVPENREA LESLPGVGRK 
TANVVLNTAF GWPTIAVDTH IDRVSNRTKF AMGKNVVEVE QKLLKVVPAE FKVDVHHWLI 
LHGRYTCIAR KPRCGSCLIE DLCEFKDKTE