| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sden_1865 |
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| Symbol | |
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| ID | 4018353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella denitrificans OS217 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007954 |
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| Strand | + |
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| Start bp | 2192703 |
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| End bp | 2194898 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 637955886 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_562871 |
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| Protein GI | 91793220 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTTAACCC TATTGGAACA ATTAGATAAA GGCACGCTGT GGCACTCTCC TGGTGGTATT
CATCCGCCAG AGCTTAAGCA TTTATCGAAT CAAACTCCTG CAGCCAAGTT ACCCTTAGCG
CCTCAGTACA TAGTGCCCGT CCCTCAGGTG GGTGAGCAAG CCATCTTGTT GGTCAATGTG
GGAGACAAGG TGCTTAAAGG GCAAGTACTG ACCCAAGGCA AAGGCTTTAG TTATCTGCCG
GTTCACGCCC CCACCTCTGG CGAGGTTATC GCCGTAGAAA CACGGCCCAG CAACCACGCC
TCTTCTTTGC CTGTAATGAG CTGCATCATA CGCCCCGACG GTAATGATAC CTGGACTGAG
TTAACACCTG CGACGTTCAC TGAGCTAAGC AACAGTCAAA TTCTCGCCCG CATTAAGGAT
GCCGGGATTG CTGGAATGGG CGGCGCGGCA TTTCCAAGCC ATATTAAGTT AAACCCTGCC
AGCGAAATCG ATTTAGTGAT AATCAATGGG GTTGAATGCG AGCCCTATAT CACAGCTGAT
GATTGCCTGA TGCGTGAATA CAATGAGCAA ATTATTGAAG GTATTGCCAT TATTCATGCC
TTATTGACGC CTGAGCGCAT TATCATCGCC ATCGAAGATA ATAAGCCCCA AGCCGCCAGT
GCCATGAAAG CTGCCATTGG CCAAGCTGAA ACCTGTGGTT TGTTGGTGCC AGGCTGCGTG
CGAGTGACTC AAATACCCAC CAAATATCCA TCCGGCGGCG AGAAACAGTT AATTCAGATT
ATCACAGGTA AAGAGGTGCC CAGTGGCACC ATTCCTGCTC AGCTTGGCAT AGTGGTGCAC
AACGTGGGTA CCGCCTTTGC CATTAAACAG GCAGTACTCG ATGGTAAACC CCTTGTAGAG
CGGTTAGTCA CTATCACGGG TGAGCGAGTC GCTCGACCTG GTAATTATTG GCTAGCCATA
GGTATGCCAA TAGATGCAGC CCTTGAAAAA ACGGGCTTTA ATCCTCAGTT GCAGCAAAAA
GTCATTGTTG GCGGCCCTAT GATGGGCTAT TCACTGCCAA ATTTAGCCGT CCCCGTGCTT
AAAGGCACTA ACTGCCTATT GGCCCCCAGT GATAATGAAA TCGCTGCAGA TGCCGAAGAA
AAAGCCTGTA TTCGCTGCGG TGAATGCGCT GTCGCCTGCC CTGCACTCTT GTTGCCCCAG
CAATTATTTT GGCATGCTAA AGCCGAAGAA TACGACAAAG CGGCCAGCTT TAATCTTAAA
GATTGTATCG AGTGTGGCTG TTGCAGCTAT GTGTGCCCAA GTGACATACC CTTAGTTGAA
TACTATCGAG TGGCAAAGTC TGCCATTCGC TTAGAGACCG AAGAAAAACT TCAGGCGGAG
AAAGCCAAAC AGCGCTTTGA AACTCGGCTG CAGCGACTCG AAGATGAGAA GCTTGCTCGG
GAAGCCAAGG CAAAAGAAGC AGCAGACAAA CGTAAGGCCG CCATGAAGAG CAGCGATAAA
AATGCCGTCG CCGAAGCCAT GGCTCGCATT GCCGCCAAAA AAGCCGCTCA AACGGCAATG
GCTTCAGGCG AAAGTTCAGT AGTAGATACC GCTTCAGCGC CTAAGGCTAG CAGCACAGAT
AAACAATCGG CAGTCGCCGC GGCGATTGCC AGAGCCAAAG CAAAGAAAGC AGCACTGGCG
GGTCTTGATG CAACCACCAG TGAAGCGCCA GCCACCCTTG ATGCAACTCG CGCTGAGCCC
ACAGAACTTG ATGACAAAAA AGCCAAGGTC GCAGCCGCTG TGGCTAGAGC CAAAGCAAAA
AAAGCGGCGT TAGCGGCCAA TTCCAATGAC GCGGCTCCTG ACTCCTCGAG TACTGGATCT
ACGAGTGTCG ATATAAGTAC TGAAGAAAAT GAAGCCACTA TAAAGGCTGA GCCAGTGGTA
GCTGAAGTCG ATGACAAAAA AGCTAAGGTT GCGGCAGCTG TAGCCAGAGC CAAGGCCAAA
AAAGCCGCGT TAGCGGCCAA GTCCGATGAA AACCCAGCGG CTGAGTCCAT TAACAGTGAA
ACGCTAGATT CTCAAGCTCC AGTTACAGAG ATTGGGGTCG CTGAAGCTGC AATAACGCCA
GCCGATGACA AGAAAGCTAA GATAGCGGCG GCGGTTGCAA AAGCGAAAGC TAAAGCGGCT
CAAAAGCGCG CCGAACAAGA ACAGCAAGAG GATTAA
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| Protein sequence | MLTLLEQLDK GTLWHSPGGI HPPELKHLSN QTPAAKLPLA PQYIVPVPQV GEQAILLVNV
GDKVLKGQVL TQGKGFSYLP VHAPTSGEVI AVETRPSNHA SSLPVMSCII RPDGNDTWTE
LTPATFTELS NSQILARIKD AGIAGMGGAA FPSHIKLNPA SEIDLVIING VECEPYITAD
DCLMREYNEQ IIEGIAIIHA LLTPERIIIA IEDNKPQAAS AMKAAIGQAE TCGLLVPGCV
RVTQIPTKYP SGGEKQLIQI ITGKEVPSGT IPAQLGIVVH NVGTAFAIKQ AVLDGKPLVE
RLVTITGERV ARPGNYWLAI GMPIDAALEK TGFNPQLQQK VIVGGPMMGY SLPNLAVPVL
KGTNCLLAPS DNEIAADAEE KACIRCGECA VACPALLLPQ QLFWHAKAEE YDKAASFNLK
DCIECGCCSY VCPSDIPLVE YYRVAKSAIR LETEEKLQAE KAKQRFETRL QRLEDEKLAR
EAKAKEAADK RKAAMKSSDK NAVAEAMARI AAKKAAQTAM ASGESSVVDT ASAPKASSTD
KQSAVAAAIA RAKAKKAALA GLDATTSEAP ATLDATRAEP TELDDKKAKV AAAVARAKAK
KAALAANSND AAPDSSSTGS TSVDISTEEN EATIKAEPVV AEVDDKKAKV AAAVARAKAK
KAALAAKSDE NPAAESINSE TLDSQAPVTE IGVAEAAITP ADDKKAKIAA AVAKAKAKAA
QKRAEQEQQE D
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